Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdt1Q8R4E9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdt1Q8R4E9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdt1Q8R4E9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdt1Q8R4E9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdt1Q8R4E9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.89■■□□□ 1.1
Cdt1Q8R4E9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdt1Q8R4E9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cdt1Q8R4E9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdt1Q8R4E9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdt1Q8R4E9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.89■■□□□ 1.09
Cdt1Q8R4E9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdt1Q8R4E9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.88■■□□□ 1.09
Cdt1Q8R4E9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.88■■□□□ 1.09
Cdt1Q8R4E9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.88■■□□□ 1.09
Cdt1Q8R4E9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cdt1Q8R4E9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdt1Q8R4E9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
Cdt1Q8R4E9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.87■■□□□ 1.09
Cdt1Q8R4E9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.87■■□□□ 1.09
Cdt1Q8R4E9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdt1Q8R4E9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdt1Q8R4E9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Cdt1Q8R4E9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdt1Q8R4E9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdt1Q8R4E9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Cdt1Q8R4E9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdt1Q8R4E9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cdt1Q8R4E9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdt1Q8R4E9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdt1Q8R4E9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.84■■□□□ 1.09
Cdt1Q8R4E9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cdt1Q8R4E9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdt1Q8R4E9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdt1Q8R4E9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdt1Q8R4E9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.83■■□□□ 1.09
Cdt1Q8R4E9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdt1Q8R4E9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdt1Q8R4E9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdt1Q8R4E9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdt1Q8R4E9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdt1Q8R4E9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Cdt1Q8R4E9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdt1Q8R4E9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cdt1Q8R4E9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdt1Q8R4E9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.82■■□□□ 1.08
Cdt1Q8R4E9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdt1Q8R4E9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdt1Q8R4E9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.81■■□□□ 1.08
Cdt1Q8R4E9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.81■■□□□ 1.08
Cdt1Q8R4E9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdt1Q8R4E9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdt1Q8R4E9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdt1Q8R4E9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdt1Q8R4E9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdt1Q8R4E9 Gm15039-201ENSMUST00000118914 875 ntBASIC21.79■■□□□ 1.08
Cdt1Q8R4E9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.79■■□□□ 1.08
Cdt1Q8R4E9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdt1Q8R4E9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdt1Q8R4E9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdt1Q8R4E9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdt1Q8R4E9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdt1Q8R4E9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdt1Q8R4E9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdt1Q8R4E9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cdt1Q8R4E9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.78■■□□□ 1.08
Cdt1Q8R4E9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdt1Q8R4E9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.76■■□□□ 1.07
Cdt1Q8R4E9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdt1Q8R4E9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdt1Q8R4E9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdt1Q8R4E9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdt1Q8R4E9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdt1Q8R4E9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdt1Q8R4E9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cdt1Q8R4E9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdt1Q8R4E9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cdt1Q8R4E9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdt1Q8R4E9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdt1Q8R4E9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdt1Q8R4E9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdt1Q8R4E9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.74■■□□□ 1.07
Cdt1Q8R4E9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdt1Q8R4E9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdt1Q8R4E9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdt1Q8R4E9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cdt1Q8R4E9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdt1Q8R4E9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdt1Q8R4E9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.72■■□□□ 1.07
Cdt1Q8R4E9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdt1Q8R4E9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdt1Q8R4E9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdt1Q8R4E9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdt1Q8R4E9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Cdt1Q8R4E9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdt1Q8R4E9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdt1Q8R4E9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Cdt1Q8R4E9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdt1Q8R4E9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdt1Q8R4E9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms