Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vmn1r28Q8R2C9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vmn1r28Q8R2C9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vmn1r28Q8R2C9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vmn1r28Q8R2C9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r28Q8R2C9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r28Q8R2C9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r28Q8R2C9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r28Q8R2C9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r28Q8R2C9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r28Q8R2C9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vmn1r28Q8R2C9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmn1r28Q8R2C9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmn1r28Q8R2C9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.84■□□□□ 0.93
Vmn1r28Q8R2C9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmn1r28Q8R2C9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmn1r28Q8R2C9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmn1r28Q8R2C9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmn1r28Q8R2C9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vmn1r28Q8R2C9 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.83■□□□□ 0.93
Vmn1r28Q8R2C9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmn1r28Q8R2C9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vmn1r28Q8R2C9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vmn1r28Q8R2C9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmn1r28Q8R2C9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 Terc-201ENSMUST00000082862 423 ntBASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Vmn1r28Q8R2C9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmn1r28Q8R2C9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vmn1r28Q8R2C9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vmn1r28Q8R2C9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vmn1r28Q8R2C9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vmn1r28Q8R2C9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmn1r28Q8R2C9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmn1r28Q8R2C9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmn1r28Q8R2C9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
Vmn1r28Q8R2C9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vmn1r28Q8R2C9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vmn1r28Q8R2C9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.76■□□□□ 0.91
Vmn1r28Q8R2C9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
Vmn1r28Q8R2C9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r28Q8R2C9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.75■□□□□ 0.91
Vmn1r28Q8R2C9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r28Q8R2C9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vmn1r28Q8R2C9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Vmn1r28Q8R2C9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r28Q8R2C9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r28Q8R2C9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmn1r28Q8R2C9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r28Q8R2C9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Vmn1r28Q8R2C9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r28Q8R2C9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r28Q8R2C9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vmn1r28Q8R2C9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r28Q8R2C9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.68■□□□□ 0.9
Vmn1r28Q8R2C9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vmn1r28Q8R2C9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r28Q8R2C9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.68■□□□□ 0.9
Vmn1r28Q8R2C9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r28Q8R2C9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Vmn1r28Q8R2C9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r28Q8R2C9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r28Q8R2C9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r28Q8R2C9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms