Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pdlim2Q8R1G6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Pdlim2Q8R1G6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pdlim2Q8R1G6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pdlim2Q8R1G6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Pdlim2Q8R1G6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Pdlim2Q8R1G6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pdlim2Q8R1G6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pdlim2Q8R1G6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Pdlim2Q8R1G6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pdlim2Q8R1G6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.61■■□□□ 1.85
Pdlim2Q8R1G6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pdlim2Q8R1G6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pdlim2Q8R1G6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pdlim2Q8R1G6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pdlim2Q8R1G6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pdlim2Q8R1G6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.59■■□□□ 1.85
Pdlim2Q8R1G6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Particl-201ENSMUST00000205370 1560 ntBASIC26.58■■□□□ 1.85
Pdlim2Q8R1G6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pdlim2Q8R1G6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pdlim2Q8R1G6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pdlim2Q8R1G6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pdlim2Q8R1G6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pdlim2Q8R1G6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pdlim2Q8R1G6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Pdlim2Q8R1G6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC26.56■■□□□ 1.84
Pdlim2Q8R1G6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Pdlim2Q8R1G6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
Pdlim2Q8R1G6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pdlim2Q8R1G6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pdlim2Q8R1G6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pdlim2Q8R1G6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pdlim2Q8R1G6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pdlim2Q8R1G6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pdlim2Q8R1G6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pdlim2Q8R1G6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pdlim2Q8R1G6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pdlim2Q8R1G6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC26.49■■□□□ 1.83
Pdlim2Q8R1G6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Pdlim2Q8R1G6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pdlim2Q8R1G6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pdlim2Q8R1G6 Gm43006-201ENSMUST00000197702 1602 ntBASIC26.49■■□□□ 1.83
Pdlim2Q8R1G6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pdlim2Q8R1G6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pdlim2Q8R1G6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pdlim2Q8R1G6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pdlim2Q8R1G6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Pdlim2Q8R1G6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pdlim2Q8R1G6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
Pdlim2Q8R1G6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pdlim2Q8R1G6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdlim2Q8R1G6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pdlim2Q8R1G6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pdlim2Q8R1G6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.45■■□□□ 1.82
Pdlim2Q8R1G6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pdlim2Q8R1G6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Pdlim2Q8R1G6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Pdlim2Q8R1G6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Pdlim2Q8R1G6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pdlim2Q8R1G6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Pdlim2Q8R1G6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdlim2Q8R1G6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Pdlim2Q8R1G6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pdlim2Q8R1G6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.39■■□□□ 1.81
Pdlim2Q8R1G6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pdlim2Q8R1G6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pdlim2Q8R1G6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pdlim2Q8R1G6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pdlim2Q8R1G6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pdlim2Q8R1G6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pdlim2Q8R1G6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Pdlim2Q8R1G6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pdlim2Q8R1G6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pdlim2Q8R1G6 Gm26115-201ENSMUST00000175605 87 ntBASIC26.36■■□□□ 1.81
Pdlim2Q8R1G6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pdlim2Q8R1G6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pdlim2Q8R1G6 Hsf1-207ENSMUST00000228371 2102 ntBASIC26.35■■□□□ 1.81
Pdlim2Q8R1G6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pdlim2Q8R1G6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms