Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
EFCAB3Q8N7B9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
EFCAB3Q8N7B9 DUX4L11-201ENST00000611504 1267 ntBASIC24.46■■□□□ 1.51
EFCAB3Q8N7B9 DUX4L12-201ENST00000614593 1267 ntBASIC24.46■■□□□ 1.51
EFCAB3Q8N7B9 DUX4L14-201ENST00000621227 1267 ntBASIC24.46■■□□□ 1.51
EFCAB3Q8N7B9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
EFCAB3Q8N7B9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.51
EFCAB3Q8N7B9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
EFCAB3Q8N7B9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
EFCAB3Q8N7B9 LINC01971-201ENST00000617888 1048 ntBASIC24.45■■□□□ 1.5
EFCAB3Q8N7B9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
EFCAB3Q8N7B9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
EFCAB3Q8N7B9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
EFCAB3Q8N7B9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
EFCAB3Q8N7B9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
EFCAB3Q8N7B9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EFCAB3Q8N7B9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.43■■□□□ 1.5
EFCAB3Q8N7B9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
EFCAB3Q8N7B9 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.43■■□□□ 1.5
EFCAB3Q8N7B9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.43■■□□□ 1.5
EFCAB3Q8N7B9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EFCAB3Q8N7B9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
EFCAB3Q8N7B9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.42■■□□□ 1.5
EFCAB3Q8N7B9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
EFCAB3Q8N7B9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
EFCAB3Q8N7B9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 CR559946.2-201ENST00000623684 991 ntBASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EFCAB3Q8N7B9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
EFCAB3Q8N7B9 AP004833.2-201ENST00000532228 1454 ntBASIC24.39■■□□□ 1.5
EFCAB3Q8N7B9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
EFCAB3Q8N7B9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
EFCAB3Q8N7B9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.39■■□□□ 1.49
EFCAB3Q8N7B9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
EFCAB3Q8N7B9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
EFCAB3Q8N7B9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EFCAB3Q8N7B9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EFCAB3Q8N7B9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EFCAB3Q8N7B9 LINC00273-201ENST00000539813 1452 ntBASIC24.37■■□□□ 1.49
EFCAB3Q8N7B9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EFCAB3Q8N7B9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EFCAB3Q8N7B9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EFCAB3Q8N7B9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.36■■□□□ 1.49
EFCAB3Q8N7B9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
EFCAB3Q8N7B9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EFCAB3Q8N7B9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EFCAB3Q8N7B9 AC091060.1-201ENST00000623524 1766 ntBASIC24.35■■□□□ 1.49
EFCAB3Q8N7B9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EFCAB3Q8N7B9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EFCAB3Q8N7B9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCAB3Q8N7B9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCAB3Q8N7B9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCAB3Q8N7B9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
EFCAB3Q8N7B9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCAB3Q8N7B9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
EFCAB3Q8N7B9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EFCAB3Q8N7B9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
EFCAB3Q8N7B9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 AC135983.2-203ENST00000454486 1613 ntBASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
EFCAB3Q8N7B9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 WHAMMP2-203ENST00000563942 1603 ntBASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 AC100797.4-201ENST00000631653 1827 ntBASIC24.31■■□□□ 1.48
EFCAB3Q8N7B9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
EFCAB3Q8N7B9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.3■■□□□ 1.48
EFCAB3Q8N7B9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCAB3Q8N7B9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.3■■□□□ 1.48
EFCAB3Q8N7B9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
EFCAB3Q8N7B9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.29■■□□□ 1.48
EFCAB3Q8N7B9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
EFCAB3Q8N7B9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCAB3Q8N7B9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCAB3Q8N7B9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.28■■□□□ 1.48
EFCAB3Q8N7B9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCAB3Q8N7B9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCAB3Q8N7B9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.28■■□□□ 1.48
EFCAB3Q8N7B9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCAB3Q8N7B9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.27■■□□□ 1.48
EFCAB3Q8N7B9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms