Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 AP004609.3-201ENST00000610705 1884 ntBASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 SUZ12P1-203ENST00000578195 985 ntBASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01561Q8N1V8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
LINC01561Q8N1V8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 AC142472.1-201ENST00000612013 1741 ntBASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01561Q8N1V8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01561Q8N1V8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01561Q8N1V8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01561Q8N1V8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LINC01561Q8N1V8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01561Q8N1V8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01561Q8N1V8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LINC01561Q8N1V8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01561Q8N1V8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01561Q8N1V8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 MIR3665-201ENST00000578708 105 ntBASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01561Q8N1V8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01561Q8N1V8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC01561Q8N1V8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LINC01561Q8N1V8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LINC01561Q8N1V8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LINC01561Q8N1V8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.58■□□□□ 0.25
LINC01561Q8N1V8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.58■□□□□ 0.25
LINC01561Q8N1V8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01561Q8N1V8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC01561Q8N1V8 DUX4L28-201ENST00000623687 678 ntBASIC16.58■□□□□ 0.24
LINC01561Q8N1V8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01561Q8N1V8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01561Q8N1V8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01561Q8N1V8 AC020928.2-201ENST00000588717 2197 ntBASIC16.57■□□□□ 0.24
LINC01561Q8N1V8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01561Q8N1V8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01561Q8N1V8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01561Q8N1V8 WHAMMP3-201ENST00000611636 1609 ntBASIC16.57■□□□□ 0.24
LINC01561Q8N1V8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01561Q8N1V8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 AC110285.7-201ENST00000624417 1536 ntBASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01561Q8N1V8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 AP006261.1-201ENST00000584783 668 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms