Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.78■■□□□ 1.72
SIX5Q8N196 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SIX5Q8N196 AC074183.2-201ENST00000623112 922 ntBASIC25.78■■□□□ 1.72
SIX5Q8N196 AL359258.2-201ENST00000564063 1566 ntBASIC25.78■■□□□ 1.72
SIX5Q8N196 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.77■■□□□ 1.72
SIX5Q8N196 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SIX5Q8N196 YBX1P4-201ENST00000392794 808 ntBASIC25.77■■□□□ 1.72
SIX5Q8N196 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SIX5Q8N196 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
SIX5Q8N196 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.76■■□□□ 1.71
SIX5Q8N196 THA1P-201ENST00000590384 1145 ntBASIC25.76■■□□□ 1.71
SIX5Q8N196 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.76■■□□□ 1.71
SIX5Q8N196 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SIX5Q8N196 AC139795.1-202ENST00000500444 432 ntBASIC25.75■■□□□ 1.71
SIX5Q8N196 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SIX5Q8N196 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SIX5Q8N196 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.74■■□□□ 1.71
SIX5Q8N196 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SIX5Q8N196 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.73■■□□□ 1.71
SIX5Q8N196 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SIX5Q8N196 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SIX5Q8N196 SPCS2P3-201ENST00000500401 656 ntBASIC25.73■■□□□ 1.71
SIX5Q8N196 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SIX5Q8N196 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.72■■□□□ 1.71
SIX5Q8N196 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SIX5Q8N196 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.72■■□□□ 1.71
SIX5Q8N196 AC093536.1-201ENST00000569153 554 ntBASIC25.72■■□□□ 1.71
SIX5Q8N196 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.71■■□□□ 1.71
SIX5Q8N196 AC025884.2-201ENST00000553429 711 ntBASIC25.71■■□□□ 1.71
SIX5Q8N196 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SIX5Q8N196 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SIX5Q8N196 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.7■■□□□ 1.71
SIX5Q8N196 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SIX5Q8N196 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SIX5Q8N196 AC103834.1-201ENST00000520383 144 ntBASIC25.7■■□□□ 1.7
SIX5Q8N196 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SIX5Q8N196 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.69■■□□□ 1.7
SIX5Q8N196 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.69■■□□□ 1.7
SIX5Q8N196 GUSBP5-201ENST00000418136 578 ntBASIC25.69■■□□□ 1.7
SIX5Q8N196 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
SIX5Q8N196 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SIX5Q8N196 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.69■■□□□ 1.7
SIX5Q8N196 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
SIX5Q8N196 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SIX5Q8N196 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.68■■□□□ 1.7
SIX5Q8N196 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.68■■□□□ 1.7
SIX5Q8N196 RAP2CP1-202ENST00000605179 643 ntBASIC25.68■■□□□ 1.7
SIX5Q8N196 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SIX5Q8N196 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SIX5Q8N196 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SIX5Q8N196 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SIX5Q8N196 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.67■■□□□ 1.7
SIX5Q8N196 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SIX5Q8N196 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.67■■□□□ 1.7
SIX5Q8N196 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SIX5Q8N196 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.67■■□□□ 1.7
SIX5Q8N196 MIR6765-201ENST00000614092 87 ntBASIC25.67■■□□□ 1.7
SIX5Q8N196 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
SIX5Q8N196 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SIX5Q8N196 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SIX5Q8N196 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SIX5Q8N196 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SIX5Q8N196 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SIX5Q8N196 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SIX5Q8N196 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SIX5Q8N196 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.65■■□□□ 1.7
SIX5Q8N196 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.65■■□□□ 1.7
SIX5Q8N196 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SIX5Q8N196 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.65■■□□□ 1.7
SIX5Q8N196 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SIX5Q8N196 PVT1_1.1-201ENST00000615125 194 ntBASIC25.64■■□□□ 1.7
SIX5Q8N196 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.64■■□□□ 1.7
SIX5Q8N196 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SIX5Q8N196 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.63■■□□□ 1.69
SIX5Q8N196 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SIX5Q8N196 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SIX5Q8N196 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SIX5Q8N196 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.62■■□□□ 1.69
SIX5Q8N196 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
SIX5Q8N196 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
SIX5Q8N196 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SIX5Q8N196 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SIX5Q8N196 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SIX5Q8N196 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.6■■□□□ 1.69
SIX5Q8N196 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.6■■□□□ 1.69
SIX5Q8N196 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.6■■□□□ 1.69
SIX5Q8N196 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.6■■□□□ 1.69
SIX5Q8N196 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SIX5Q8N196 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SIX5Q8N196 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.6■■□□□ 1.69
SIX5Q8N196 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.59■■□□□ 1.69
SIX5Q8N196 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.59■■□□□ 1.69
SIX5Q8N196 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SIX5Q8N196 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SIX5Q8N196 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.59■■□□□ 1.69
SIX5Q8N196 AC018755.3-202ENST00000596210 929 ntBASIC25.59■■□□□ 1.69
SIX5Q8N196 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.59■■□□□ 1.69
SIX5Q8N196 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SIX5Q8N196 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SIX5Q8N196 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms