Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
ABCA6Q8N139 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC37.95■■■■□ 3.67
ABCA6Q8N139 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC37.95■■■■□ 3.67
ABCA6Q8N139 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC37.94■■■■□ 3.66
ABCA6Q8N139 SMPD5-203ENST00000639008 1464 ntBASIC37.94■■■■□ 3.66
ABCA6Q8N139 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
ABCA6Q8N139 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
ABCA6Q8N139 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC37.93■■■■□ 3.66
ABCA6Q8N139 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC37.92■■■■□ 3.66
ABCA6Q8N139 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
ABCA6Q8N139 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
ABCA6Q8N139 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC37.91■■■■□ 3.66
ABCA6Q8N139 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA6Q8N139 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA6Q8N139 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA6Q8N139 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC37.9■■■■□ 3.66
ABCA6Q8N139 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA6Q8N139 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC37.9■■■■□ 3.66
ABCA6Q8N139 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
ABCA6Q8N139 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
ABCA6Q8N139 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
ABCA6Q8N139 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC37.88■■■■□ 3.65
ABCA6Q8N139 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC37.88■■■■□ 3.65
ABCA6Q8N139 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
ABCA6Q8N139 GUSBP5-201ENST00000418136 578 ntBASIC37.87■■■■□ 3.65
ABCA6Q8N139 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC37.87■■■■□ 3.65
ABCA6Q8N139 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
ABCA6Q8N139 PVT1_1.1-201ENST00000615125 194 ntBASIC37.87■■■■□ 3.65
ABCA6Q8N139 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
ABCA6Q8N139 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC37.86■■■■□ 3.65
ABCA6Q8N139 AC131212.1-201ENST00000613771 668 ntBASIC37.86■■■■□ 3.65
ABCA6Q8N139 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
ABCA6Q8N139 RP9P-202ENST00000450133 1212 ntBASIC37.85■■■■□ 3.65
ABCA6Q8N139 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
ABCA6Q8N139 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
ABCA6Q8N139 AC103834.1-201ENST00000520383 144 ntBASIC37.84■■■■□ 3.65
ABCA6Q8N139 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
ABCA6Q8N139 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
ABCA6Q8N139 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC37.83■■■■□ 3.65
ABCA6Q8N139 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC37.83■■■■□ 3.65
ABCA6Q8N139 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC37.83■■■■□ 3.65
ABCA6Q8N139 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC37.81■■■■□ 3.64
ABCA6Q8N139 AL359258.2-201ENST00000564063 1566 ntBASIC37.81■■■■□ 3.64
ABCA6Q8N139 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC37.8■■■■□ 3.64
ABCA6Q8N139 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC37.8■■■■□ 3.64
ABCA6Q8N139 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC37.8■■■■□ 3.64
ABCA6Q8N139 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
ABCA6Q8N139 HES6-204ENST00000409182 863 ntTSL 2 BASIC37.8■■■■□ 3.64
ABCA6Q8N139 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC37.8■■■■□ 3.64
ABCA6Q8N139 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
ABCA6Q8N139 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC37.8■■■■□ 3.64
ABCA6Q8N139 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
ABCA6Q8N139 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC37.79■■■■□ 3.64
ABCA6Q8N139 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC37.79■■■■□ 3.64
ABCA6Q8N139 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
ABCA6Q8N139 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
ABCA6Q8N139 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC37.78■■■■□ 3.64
ABCA6Q8N139 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
ABCA6Q8N139 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
ABCA6Q8N139 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC37.76■■■■□ 3.64
ABCA6Q8N139 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
ABCA6Q8N139 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC37.76■■■■□ 3.64
ABCA6Q8N139 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC37.76■■■■□ 3.64
ABCA6Q8N139 MIR4508-201ENST00000584178 70 ntBASIC37.76■■■■□ 3.63
ABCA6Q8N139 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
ABCA6Q8N139 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC37.75■■■■□ 3.63
ABCA6Q8N139 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
ABCA6Q8N139 MIR6765-201ENST00000614092 87 ntBASIC37.75■■■■□ 3.63
ABCA6Q8N139 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC37.74■■■■□ 3.63
ABCA6Q8N139 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC37.74■■■■□ 3.63
ABCA6Q8N139 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC37.74■■■■□ 3.63
ABCA6Q8N139 OR2A1-AS1-204ENST00000470435 602 ntBASIC37.73■■■■□ 3.63
ABCA6Q8N139 THA1P-201ENST00000590384 1145 ntBASIC37.73■■■■□ 3.63
ABCA6Q8N139 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC37.72■■■■□ 3.63
ABCA6Q8N139 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC37.72■■■■□ 3.63
ABCA6Q8N139 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC37.72■■■■□ 3.63
ABCA6Q8N139 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC37.72■■■■□ 3.63
ABCA6Q8N139 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC37.72■■■■□ 3.63
ABCA6Q8N139 AC074183.2-201ENST00000623112 922 ntBASIC37.72■■■■□ 3.63
ABCA6Q8N139 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
ABCA6Q8N139 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC37.71■■■■□ 3.63
ABCA6Q8N139 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC37.71■■■■□ 3.63
ABCA6Q8N139 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC37.71■■■■□ 3.63
ABCA6Q8N139 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC37.71■■■■□ 3.63
ABCA6Q8N139 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
ABCA6Q8N139 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC37.71■■■■□ 3.63
ABCA6Q8N139 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC37.71■■■■□ 3.63
ABCA6Q8N139 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
ABCA6Q8N139 AC139795.1-202ENST00000500444 432 ntBASIC37.7■■■■□ 3.63
ABCA6Q8N139 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
ABCA6Q8N139 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC37.69■■■■□ 3.62
ABCA6Q8N139 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC37.68■■■■□ 3.62
ABCA6Q8N139 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC37.67■■■■□ 3.62
ABCA6Q8N139 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC37.67■■■■□ 3.62
ABCA6Q8N139 AC103724.3-201ENST00000564481 992 ntBASIC37.67■■■■□ 3.62
ABCA6Q8N139 BHLHE23-202ENST00000612929 1109 ntBASIC37.67■■■■□ 3.62
ABCA6Q8N139 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC37.66■■■■□ 3.62
ABCA6Q8N139 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC37.65■■■■□ 3.62
ABCA6Q8N139 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC37.65■■■■□ 3.62
ABCA6Q8N139 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC37.65■■■■□ 3.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms