Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28aQ8K3Y3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28aQ8K3Y3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28aQ8K3Y3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.25■□□□□ 0.99
Lin28aQ8K3Y3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28aQ8K3Y3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lin28aQ8K3Y3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lin28aQ8K3Y3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lin28aQ8K3Y3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin28aQ8K3Y3 Terc-201ENSMUST00000082862 423 ntBASIC21.24■□□□□ 0.99
Lin28aQ8K3Y3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lin28aQ8K3Y3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
Lin28aQ8K3Y3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.23■□□□□ 0.99
Lin28aQ8K3Y3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28aQ8K3Y3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28aQ8K3Y3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28aQ8K3Y3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28aQ8K3Y3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lin28aQ8K3Y3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lin28aQ8K3Y3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.22■□□□□ 0.99
Lin28aQ8K3Y3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lin28aQ8K3Y3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lin28aQ8K3Y3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lin28aQ8K3Y3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lin28aQ8K3Y3 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.21■□□□□ 0.99
Lin28aQ8K3Y3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lin28aQ8K3Y3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lin28aQ8K3Y3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lin28aQ8K3Y3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lin28aQ8K3Y3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lin28aQ8K3Y3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lin28aQ8K3Y3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin28aQ8K3Y3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.18■□□□□ 0.98
Lin28aQ8K3Y3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lin28aQ8K3Y3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lin28aQ8K3Y3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.18■□□□□ 0.98
Lin28aQ8K3Y3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lin28aQ8K3Y3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28aQ8K3Y3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.17■□□□□ 0.98
Lin28aQ8K3Y3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28aQ8K3Y3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28aQ8K3Y3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28aQ8K3Y3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28aQ8K3Y3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28aQ8K3Y3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28aQ8K3Y3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28aQ8K3Y3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lin28aQ8K3Y3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Lin28aQ8K3Y3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Lin28aQ8K3Y3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lin28aQ8K3Y3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lin28aQ8K3Y3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.14■□□□□ 0.97
Lin28aQ8K3Y3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lin28aQ8K3Y3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.13■□□□□ 0.97
Lin28aQ8K3Y3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28aQ8K3Y3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.12■□□□□ 0.97
Lin28aQ8K3Y3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28aQ8K3Y3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28aQ8K3Y3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28aQ8K3Y3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28aQ8K3Y3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.11■□□□□ 0.97
Lin28aQ8K3Y3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28aQ8K3Y3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lin28aQ8K3Y3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28aQ8K3Y3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28aQ8K3Y3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28aQ8K3Y3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28aQ8K3Y3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28aQ8K3Y3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28aQ8K3Y3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28aQ8K3Y3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lin28aQ8K3Y3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Lin28aQ8K3Y3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.07■□□□□ 0.96
Lin28aQ8K3Y3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lin28aQ8K3Y3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.07■□□□□ 0.96
Lin28aQ8K3Y3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lin28aQ8K3Y3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lin28aQ8K3Y3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms