Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.85■■□□□ 1.89
Cchcr1Q8K2I2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cchcr1Q8K2I2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Cchcr1Q8K2I2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cchcr1Q8K2I2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cchcr1Q8K2I2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Cchcr1Q8K2I2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cchcr1Q8K2I2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.82■■□□□ 1.88
Cchcr1Q8K2I2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Cchcr1Q8K2I2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.82■■□□□ 1.88
Cchcr1Q8K2I2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Cchcr1Q8K2I2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Cchcr1Q8K2I2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cchcr1Q8K2I2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.8■■□□□ 1.88
Cchcr1Q8K2I2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Cchcr1Q8K2I2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cchcr1Q8K2I2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cchcr1Q8K2I2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.79■■□□□ 1.88
Cchcr1Q8K2I2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.79■■□□□ 1.88
Cchcr1Q8K2I2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cchcr1Q8K2I2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cchcr1Q8K2I2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cchcr1Q8K2I2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cchcr1Q8K2I2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Cchcr1Q8K2I2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
Cchcr1Q8K2I2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Cchcr1Q8K2I2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cchcr1Q8K2I2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Cchcr1Q8K2I2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cchcr1Q8K2I2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Cchcr1Q8K2I2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cchcr1Q8K2I2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cchcr1Q8K2I2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cchcr1Q8K2I2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cchcr1Q8K2I2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cchcr1Q8K2I2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cchcr1Q8K2I2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cchcr1Q8K2I2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cchcr1Q8K2I2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cchcr1Q8K2I2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cchcr1Q8K2I2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
Cchcr1Q8K2I2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Cchcr1Q8K2I2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cchcr1Q8K2I2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cchcr1Q8K2I2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cchcr1Q8K2I2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cchcr1Q8K2I2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Cchcr1Q8K2I2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Cchcr1Q8K2I2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cchcr1Q8K2I2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cchcr1Q8K2I2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.7■■□□□ 1.86
Cchcr1Q8K2I2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cchcr1Q8K2I2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cchcr1Q8K2I2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cchcr1Q8K2I2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Cchcr1Q8K2I2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Cchcr1Q8K2I2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cchcr1Q8K2I2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cchcr1Q8K2I2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cchcr1Q8K2I2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cchcr1Q8K2I2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cchcr1Q8K2I2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cchcr1Q8K2I2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cchcr1Q8K2I2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cchcr1Q8K2I2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cchcr1Q8K2I2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.66■■□□□ 1.86
Cchcr1Q8K2I2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.66■■□□□ 1.86
Cchcr1Q8K2I2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cchcr1Q8K2I2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.65■■□□□ 1.86
Cchcr1Q8K2I2 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.65■■□□□ 1.86
Cchcr1Q8K2I2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
Cchcr1Q8K2I2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cchcr1Q8K2I2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cchcr1Q8K2I2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cchcr1Q8K2I2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Cchcr1Q8K2I2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cchcr1Q8K2I2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Cchcr1Q8K2I2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
Cchcr1Q8K2I2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.63■■□□□ 1.85
Cchcr1Q8K2I2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Cchcr1Q8K2I2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cchcr1Q8K2I2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cchcr1Q8K2I2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cchcr1Q8K2I2 Gm4799-201ENSMUST00000095396 657 ntBASIC26.61■■□□□ 1.85
Cchcr1Q8K2I2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cchcr1Q8K2I2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.6■■□□□ 1.85
Cchcr1Q8K2I2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cchcr1Q8K2I2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cchcr1Q8K2I2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.58■■□□□ 1.85
Cchcr1Q8K2I2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Cchcr1Q8K2I2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.58■■□□□ 1.85
Cchcr1Q8K2I2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.57■■□□□ 1.84
Cchcr1Q8K2I2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cchcr1Q8K2I2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms