Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot3Q8K0V4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cnot3Q8K0V4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.27■■□□□ 1
Cnot3Q8K0V4 Zfp131-205ENSMUST00000223812 663 ntBASIC21.27■■□□□ 1
Cnot3Q8K0V4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cnot3Q8K0V4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot3Q8K0V4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnot3Q8K0V4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot3Q8K0V4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot3Q8K0V4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot3Q8K0V4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot3Q8K0V4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 Gm24970-201ENSMUST00000175582 82 ntBASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot3Q8K0V4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Cnot3Q8K0V4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cnot3Q8K0V4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cnot3Q8K0V4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cnot3Q8K0V4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot3Q8K0V4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cnot3Q8K0V4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cnot3Q8K0V4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot3Q8K0V4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot3Q8K0V4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot3Q8K0V4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot3Q8K0V4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot3Q8K0V4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cnot3Q8K0V4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot3Q8K0V4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot3Q8K0V4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cnot3Q8K0V4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot3Q8K0V4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot3Q8K0V4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cnot3Q8K0V4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.19■□□□□ 0.98
Cnot3Q8K0V4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cnot3Q8K0V4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot3Q8K0V4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Cnot3Q8K0V4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnot3Q8K0V4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Cnot3Q8K0V4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Gm9397-201ENSMUST00000200125 605 ntBASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cnot3Q8K0V4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot3Q8K0V4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot3Q8K0V4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot3Q8K0V4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot3Q8K0V4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot3Q8K0V4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cnot3Q8K0V4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot3Q8K0V4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot3Q8K0V4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot3Q8K0V4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot3Q8K0V4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.14■□□□□ 0.98
Cnot3Q8K0V4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cnot3Q8K0V4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cnot3Q8K0V4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cnot3Q8K0V4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cnot3Q8K0V4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot3Q8K0V4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot3Q8K0V4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot3Q8K0V4 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot3Q8K0V4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot3Q8K0V4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.1■□□□□ 0.97
Cnot3Q8K0V4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot3Q8K0V4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot3Q8K0V4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.09■□□□□ 0.97
Cnot3Q8K0V4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cnot3Q8K0V4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cnot3Q8K0V4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms