Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn4rl1Q8K0S5 Amer2-203ENSMUST00000225247 2662 ntBASIC23.59■■□□□ 1.37
Rtn4rl1Q8K0S5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.58■■□□□ 1.37
Rtn4rl1Q8K0S5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rtn4rl1Q8K0S5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm22567-201ENSMUST00000175542 342 ntBASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
Rtn4rl1Q8K0S5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm15546-201ENSMUST00000122095 826 ntBASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn4rl1Q8K0S5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Rtn4rl1Q8K0S5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rtn4rl1Q8K0S5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rtn4rl1Q8K0S5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rtn4rl1Q8K0S5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rtn4rl1Q8K0S5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Rtn4rl1Q8K0S5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rtn4rl1Q8K0S5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Rtn4rl1Q8K0S5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Gm13238-201ENSMUST00000117655 780 ntBASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rtn4rl1Q8K0S5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rtn4rl1Q8K0S5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rtn4rl1Q8K0S5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rtn4rl1Q8K0S5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.39■■□□□ 1.34
Rtn4rl1Q8K0S5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn4rl1Q8K0S5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn4rl1Q8K0S5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn4rl1Q8K0S5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn4rl1Q8K0S5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Rtn4rl1Q8K0S5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Rtn4rl1Q8K0S5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rtn4rl1Q8K0S5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.35■■□□□ 1.33
Rtn4rl1Q8K0S5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.34■■□□□ 1.33
Rtn4rl1Q8K0S5 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.34■■□□□ 1.33
Rtn4rl1Q8K0S5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Gm15039-201ENSMUST00000118914 875 ntBASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Gm43566-201ENSMUST00000196851 808 ntBASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rtn4rl1Q8K0S5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.33■■□□□ 1.32
Rtn4rl1Q8K0S5 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.32■■□□□ 1.32
Rtn4rl1Q8K0S5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn4rl1Q8K0S5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms