Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TMEFF1Q8IYR6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEFF1Q8IYR6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEFF1Q8IYR6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TMEFF1Q8IYR6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEFF1Q8IYR6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TMEFF1Q8IYR6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEFF1Q8IYR6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.03■■□□□ 1.6
TMEFF1Q8IYR6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TMEFF1Q8IYR6 AC026202.3-201ENST00000600805 1127 ntBASIC25.02■■□□□ 1.6
TMEFF1Q8IYR6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEFF1Q8IYR6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEFF1Q8IYR6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 AP004833.2-201ENST00000532228 1454 ntBASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.01■■□□□ 1.59
TMEFF1Q8IYR6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMEFF1Q8IYR6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25■■□□□ 1.59
TMEFF1Q8IYR6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TMEFF1Q8IYR6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
TMEFF1Q8IYR6 ST7-AS1-201ENST00000456775 1889 ntBASIC24.99■■□□□ 1.59
TMEFF1Q8IYR6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.99■■□□□ 1.59
TMEFF1Q8IYR6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMEFF1Q8IYR6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
TMEFF1Q8IYR6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEFF1Q8IYR6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEFF1Q8IYR6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEFF1Q8IYR6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.97■■□□□ 1.59
TMEFF1Q8IYR6 AL451085.2-201ENST00000605085 799 ntBASIC24.97■■□□□ 1.59
TMEFF1Q8IYR6 AL035685.1-201ENST00000636663 812 ntBASIC24.97■■□□□ 1.59
TMEFF1Q8IYR6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEFF1Q8IYR6 BHLHE23-202ENST00000612929 1109 ntBASIC24.96■■□□□ 1.59
TMEFF1Q8IYR6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMEFF1Q8IYR6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.96■■□□□ 1.59
TMEFF1Q8IYR6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 DUX4L9-201ENST00000449051 1259 ntBASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TMEFF1Q8IYR6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEFF1Q8IYR6 AC025884.2-201ENST00000553429 711 ntBASIC24.94■■□□□ 1.58
TMEFF1Q8IYR6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.94■■□□□ 1.58
TMEFF1Q8IYR6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEFF1Q8IYR6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.93■■□□□ 1.58
TMEFF1Q8IYR6 ABCB10P1-201ENST00000614297 2181 ntBASIC24.93■■□□□ 1.58
TMEFF1Q8IYR6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TMEFF1Q8IYR6 RP9P-202ENST00000450133 1212 ntBASIC24.93■■□□□ 1.58
TMEFF1Q8IYR6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
TMEFF1Q8IYR6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.93■■□□□ 1.58
TMEFF1Q8IYR6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEFF1Q8IYR6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMEFF1Q8IYR6 AC093536.1-201ENST00000569153 554 ntBASIC24.92■■□□□ 1.58
TMEFF1Q8IYR6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.92■■□□□ 1.58
TMEFF1Q8IYR6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
TMEFF1Q8IYR6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEFF1Q8IYR6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
TMEFF1Q8IYR6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 AC010980.1-201ENST00000587192 1142 ntBASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
TMEFF1Q8IYR6 KRT8P33-201ENST00000508125 1423 ntBASIC24.89■■□□□ 1.58
TMEFF1Q8IYR6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TMEFF1Q8IYR6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.89■■□□□ 1.58
TMEFF1Q8IYR6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TMEFF1Q8IYR6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 SPCS2P3-201ENST00000500401 656 ntBASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
TMEFF1Q8IYR6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TMEFF1Q8IYR6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.86■■□□□ 1.57
TMEFF1Q8IYR6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMEFF1Q8IYR6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.85■■□□□ 1.57
TMEFF1Q8IYR6 RAP2CP1-202ENST00000605179 643 ntBASIC24.85■■□□□ 1.57
TMEFF1Q8IYR6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
TMEFF1Q8IYR6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TMEFF1Q8IYR6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms