Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.67■■□□□ 1.22
RP1L1Q8IWN7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RP1L1Q8IWN7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RP1L1Q8IWN7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.66■■□□□ 1.22
RP1L1Q8IWN7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.66■■□□□ 1.22
RP1L1Q8IWN7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
RP1L1Q8IWN7 GUSBP5-201ENST00000418136 578 ntBASIC22.66■■□□□ 1.22
RP1L1Q8IWN7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RP1L1Q8IWN7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RP1L1Q8IWN7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RP1L1Q8IWN7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.64■■□□□ 1.22
RP1L1Q8IWN7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.64■■□□□ 1.22
RP1L1Q8IWN7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RP1L1Q8IWN7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RP1L1Q8IWN7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RP1L1Q8IWN7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RP1L1Q8IWN7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.64■■□□□ 1.21
RP1L1Q8IWN7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.64■■□□□ 1.21
RP1L1Q8IWN7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.64■■□□□ 1.21
RP1L1Q8IWN7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.63■■□□□ 1.21
RP1L1Q8IWN7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.63■■□□□ 1.21
RP1L1Q8IWN7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RP1L1Q8IWN7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RP1L1Q8IWN7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RP1L1Q8IWN7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.63■■□□□ 1.21
RP1L1Q8IWN7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 AC025884.2-201ENST00000553429 711 ntBASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 AC026202.3-201ENST00000600805 1127 ntBASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 AC074183.2-201ENST00000623112 922 ntBASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RP1L1Q8IWN7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.61■■□□□ 1.21
RP1L1Q8IWN7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RP1L1Q8IWN7 AC010980.1-201ENST00000587192 1142 ntBASIC22.61■■□□□ 1.21
RP1L1Q8IWN7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.61■■□□□ 1.21
RP1L1Q8IWN7 AL359258.2-201ENST00000564063 1566 ntBASIC22.61■■□□□ 1.21
RP1L1Q8IWN7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.61■■□□□ 1.21
RP1L1Q8IWN7 MIR935-201ENST00000401179 91 ntBASIC22.6■■□□□ 1.21
RP1L1Q8IWN7 AC139795.1-202ENST00000500444 432 ntBASIC22.6■■□□□ 1.21
RP1L1Q8IWN7 SMPD5-203ENST00000639008 1464 ntBASIC22.6■■□□□ 1.21
RP1L1Q8IWN7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RP1L1Q8IWN7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RP1L1Q8IWN7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RP1L1Q8IWN7 BHLHE23-202ENST00000612929 1109 ntBASIC22.58■■□□□ 1.21
RP1L1Q8IWN7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.58■■□□□ 1.21
RP1L1Q8IWN7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RP1L1Q8IWN7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
RP1L1Q8IWN7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RP1L1Q8IWN7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RP1L1Q8IWN7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RP1L1Q8IWN7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.56■■□□□ 1.2
RP1L1Q8IWN7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RP1L1Q8IWN7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RP1L1Q8IWN7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.55■■□□□ 1.2
RP1L1Q8IWN7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RP1L1Q8IWN7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 YBX1P4-201ENST00000392794 808 ntBASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RP1L1Q8IWN7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 AL356441.2-201ENST00000443009 864 ntBASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 THA1P-201ENST00000590384 1145 ntBASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 ST7-AS1-201ENST00000456775 1889 ntBASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RP1L1Q8IWN7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RP1L1Q8IWN7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RP1L1Q8IWN7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RP1L1Q8IWN7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RP1L1Q8IWN7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RP1L1Q8IWN7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms