Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Pabpn1Q8CCS6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC37.27■■■■□ 3.56
Pabpn1Q8CCS6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC37.26■■■■□ 3.56
Pabpn1Q8CCS6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
Pabpn1Q8CCS6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC37.25■■■■□ 3.55
Pabpn1Q8CCS6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC37.25■■■■□ 3.55
Pabpn1Q8CCS6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC37.25■■■■□ 3.55
Pabpn1Q8CCS6 Gm44428-201ENSMUST00000204474 874 ntBASIC37.24■■■■□ 3.55
Pabpn1Q8CCS6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC37.23■■■■□ 3.55
Pabpn1Q8CCS6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Pabpn1Q8CCS6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Pabpn1Q8CCS6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC37.22■■■■□ 3.55
Pabpn1Q8CCS6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Pabpn1Q8CCS6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Pabpn1Q8CCS6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC37.19■■■■□ 3.54
Pabpn1Q8CCS6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC37.18■■■■□ 3.54
Pabpn1Q8CCS6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
Pabpn1Q8CCS6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
Pabpn1Q8CCS6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC37.16■■■■□ 3.54
Pabpn1Q8CCS6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Pabpn1Q8CCS6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC37.15■■■■□ 3.54
Pabpn1Q8CCS6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC37.15■■■■□ 3.54
Pabpn1Q8CCS6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC37.15■■■■□ 3.54
Pabpn1Q8CCS6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
Pabpn1Q8CCS6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC37.13■■■■□ 3.54
Pabpn1Q8CCS6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
Pabpn1Q8CCS6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Pabpn1Q8CCS6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Pabpn1Q8CCS6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Pabpn1Q8CCS6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Pabpn1Q8CCS6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC37.11■■■■□ 3.53
Pabpn1Q8CCS6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Pabpn1Q8CCS6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Pabpn1Q8CCS6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC37.09■■■■□ 3.53
Pabpn1Q8CCS6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC37.09■■■■□ 3.53
Pabpn1Q8CCS6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Pabpn1Q8CCS6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC37.08■■■■□ 3.53
Pabpn1Q8CCS6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Pabpn1Q8CCS6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC37.07■■■■□ 3.52
Pabpn1Q8CCS6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC37.07■■■■□ 3.52
Pabpn1Q8CCS6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Pabpn1Q8CCS6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC37.07■■■■□ 3.52
Pabpn1Q8CCS6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC37.07■■■■□ 3.52
Pabpn1Q8CCS6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC37.07■■■■□ 3.52
Pabpn1Q8CCS6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Pabpn1Q8CCS6 Gm21956-201ENSMUST00000179946 522 ntBASIC37.06■■■■□ 3.52
Pabpn1Q8CCS6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC37.06■■■■□ 3.52
Pabpn1Q8CCS6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC37.06■■■■□ 3.52
Pabpn1Q8CCS6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Pabpn1Q8CCS6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC37.05■■■■□ 3.52
Pabpn1Q8CCS6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Pabpn1Q8CCS6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC37.03■■■■□ 3.52
Pabpn1Q8CCS6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Pabpn1Q8CCS6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC37.02■■■■□ 3.52
Pabpn1Q8CCS6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
Pabpn1Q8CCS6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC37.01■■■■□ 3.52
Pabpn1Q8CCS6 Gm10232-201ENSMUST00000089221 720 ntBASIC37.01■■■■□ 3.52
Pabpn1Q8CCS6 Gm6658-202ENSMUST00000209493 1885 ntBASIC37.01■■■■□ 3.51
Pabpn1Q8CCS6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Pabpn1Q8CCS6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Pabpn1Q8CCS6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
Pabpn1Q8CCS6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC36.99■■■■□ 3.51
Pabpn1Q8CCS6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
Pabpn1Q8CCS6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pabpn1Q8CCS6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Pabpn1Q8CCS6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pabpn1Q8CCS6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pabpn1Q8CCS6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Pabpn1Q8CCS6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Pabpn1Q8CCS6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC36.97■■■■□ 3.51
Pabpn1Q8CCS6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Pabpn1Q8CCS6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Pabpn1Q8CCS6 Gm9847-201ENSMUST00000052528 599 ntBASIC36.96■■■■□ 3.51
Pabpn1Q8CCS6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
Pabpn1Q8CCS6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC36.95■■■■□ 3.51
Pabpn1Q8CCS6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC36.94■■■■□ 3.5
Pabpn1Q8CCS6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC36.93■■■■□ 3.5
Pabpn1Q8CCS6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Pabpn1Q8CCS6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC36.93■■■■□ 3.5
Pabpn1Q8CCS6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Pabpn1Q8CCS6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
Pabpn1Q8CCS6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
Pabpn1Q8CCS6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC36.91■■■■□ 3.5
Pabpn1Q8CCS6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Pabpn1Q8CCS6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC36.91■■■■□ 3.5
Pabpn1Q8CCS6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC36.91■■■■□ 3.5
Pabpn1Q8CCS6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Pabpn1Q8CCS6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Pabpn1Q8CCS6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC36.9■■■■□ 3.5
Pabpn1Q8CCS6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC36.89■■■■□ 3.5
Pabpn1Q8CCS6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC36.89■■■■□ 3.5
Pabpn1Q8CCS6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
Pabpn1Q8CCS6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC36.88■■■■□ 3.5
Pabpn1Q8CCS6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Pabpn1Q8CCS6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Pabpn1Q8CCS6 Gm5131-201ENSMUST00000212776 1238 ntBASIC36.88■■■■□ 3.49
Pabpn1Q8CCS6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC36.88■■■■□ 3.49
Pabpn1Q8CCS6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Pabpn1Q8CCS6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Pabpn1Q8CCS6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC36.86■■■■□ 3.49
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms