Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Scarna2-201ENSMUST00000157560 414 ntBASIC21.75■■□□□ 1.07
SynpoQ8CC35 Mir3960-201ENSMUST00000198213 73 ntBASIC21.75■■□□□ 1.07
SynpoQ8CC35 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.75■■□□□ 1.07
SynpoQ8CC35 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SynpoQ8CC35 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SynpoQ8CC35 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SynpoQ8CC35 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SynpoQ8CC35 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SynpoQ8CC35 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynpoQ8CC35 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Gm11687-201ENSMUST00000118911 886 ntBASIC21.73■■□□□ 1.07
SynpoQ8CC35 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SynpoQ8CC35 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SynpoQ8CC35 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SynpoQ8CC35 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.72■■□□□ 1.07
SynpoQ8CC35 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SynpoQ8CC35 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SynpoQ8CC35 Gm9806-201ENSMUST00000051080 552 ntBASIC21.72■■□□□ 1.07
SynpoQ8CC35 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SynpoQ8CC35 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SynpoQ8CC35 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SynpoQ8CC35 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.71■■□□□ 1.07
SynpoQ8CC35 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SynpoQ8CC35 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SynpoQ8CC35 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.71■■□□□ 1.07
SynpoQ8CC35 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SynpoQ8CC35 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SynpoQ8CC35 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SynpoQ8CC35 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SynpoQ8CC35 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SynpoQ8CC35 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SynpoQ8CC35 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SynpoQ8CC35 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.68■■□□□ 1.06
SynpoQ8CC35 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SynpoQ8CC35 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.67■■□□□ 1.06
SynpoQ8CC35 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SynpoQ8CC35 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.67■■□□□ 1.06
SynpoQ8CC35 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SynpoQ8CC35 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SynpoQ8CC35 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SynpoQ8CC35 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SynpoQ8CC35 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SynpoQ8CC35 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SynpoQ8CC35 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.65■■□□□ 1.06
SynpoQ8CC35 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SynpoQ8CC35 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SynpoQ8CC35 Gm16437-201ENSMUST00000025669 507 ntBASIC21.65■■□□□ 1.06
SynpoQ8CC35 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SynpoQ8CC35 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SynpoQ8CC35 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SynpoQ8CC35 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
SynpoQ8CC35 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SynpoQ8CC35 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SynpoQ8CC35 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SynpoQ8CC35 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SynpoQ8CC35 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SynpoQ8CC35 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.61■■□□□ 1.05
SynpoQ8CC35 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.61■■□□□ 1.05
SynpoQ8CC35 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SynpoQ8CC35 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SynpoQ8CC35 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SynpoQ8CC35 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SynpoQ8CC35 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.59■■□□□ 1.05
SynpoQ8CC35 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SynpoQ8CC35 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SynpoQ8CC35 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.57■■□□□ 1.04
SynpoQ8CC35 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.57■■□□□ 1.04
SynpoQ8CC35 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SynpoQ8CC35 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms