Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Uba3Q8C878 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Uba3Q8C878 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Uba3Q8C878 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Uba3Q8C878 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Uba3Q8C878 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Uba3Q8C878 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Uba3Q8C878 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Uba3Q8C878 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Uba3Q8C878 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Uba3Q8C878 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Uba3Q8C878 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Uba3Q8C878 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Uba3Q8C878 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Uba3Q8C878 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.96■■□□□ 1.43
Uba3Q8C878 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Uba3Q8C878 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.95■■□□□ 1.42
Uba3Q8C878 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Uba3Q8C878 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Uba3Q8C878 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Uba3Q8C878 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.95■■□□□ 1.42
Uba3Q8C878 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uba3Q8C878 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uba3Q8C878 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uba3Q8C878 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Uba3Q8C878 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Uba3Q8C878 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uba3Q8C878 Scarna2-201ENSMUST00000157560 414 ntBASIC23.92■■□□□ 1.42
Uba3Q8C878 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uba3Q8C878 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Uba3Q8C878 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uba3Q8C878 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.89■■□□□ 1.41
Uba3Q8C878 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Uba3Q8C878 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Uba3Q8C878 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Uba3Q8C878 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.89■■□□□ 1.41
Uba3Q8C878 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Uba3Q8C878 Gm11175-201ENSMUST00000116172 543 ntBASIC23.88■■□□□ 1.41
Uba3Q8C878 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.88■■□□□ 1.41
Uba3Q8C878 Gm16437-201ENSMUST00000025669 507 ntBASIC23.88■■□□□ 1.41
Uba3Q8C878 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Uba3Q8C878 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Uba3Q8C878 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uba3Q8C878 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.87■■□□□ 1.41
Uba3Q8C878 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uba3Q8C878 Terc-201ENSMUST00000082862 423 ntBASIC23.86■■□□□ 1.41
Uba3Q8C878 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uba3Q8C878 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uba3Q8C878 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uba3Q8C878 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uba3Q8C878 Gm9806-201ENSMUST00000051080 552 ntBASIC23.85■■□□□ 1.41
Uba3Q8C878 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Uba3Q8C878 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uba3Q8C878 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uba3Q8C878 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uba3Q8C878 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
Uba3Q8C878 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.84■■□□□ 1.41
Uba3Q8C878 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uba3Q8C878 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.84■■□□□ 1.41
Uba3Q8C878 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.84■■□□□ 1.41
Uba3Q8C878 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uba3Q8C878 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uba3Q8C878 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Uba3Q8C878 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uba3Q8C878 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Uba3Q8C878 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uba3Q8C878 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Uba3Q8C878 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Uba3Q8C878 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uba3Q8C878 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Uba3Q8C878 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Uba3Q8C878 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Uba3Q8C878 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Uba3Q8C878 Gm11687-201ENSMUST00000118911 886 ntBASIC23.78■■□□□ 1.4
Uba3Q8C878 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uba3Q8C878 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Uba3Q8C878 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Uba3Q8C878 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Uba3Q8C878 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Uba3Q8C878 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Uba3Q8C878 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Uba3Q8C878 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.39
Uba3Q8C878 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Uba3Q8C878 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Uba3Q8C878 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Uba3Q8C878 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.75■■□□□ 1.39
Uba3Q8C878 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Uba3Q8C878 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uba3Q8C878 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Uba3Q8C878 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.74■■□□□ 1.39
Uba3Q8C878 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.74■■□□□ 1.39
Uba3Q8C878 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uba3Q8C878 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms