Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC32.71■■■□□ 2.83
Usp47Q8BY87 Gm27502-201ENSMUST00000183495 199 ntBASIC32.71■■■□□ 2.83
Usp47Q8BY87 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC32.71■■■□□ 2.83
Usp47Q8BY87 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Usp47Q8BY87 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Usp47Q8BY87 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Usp47Q8BY87 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Usp47Q8BY87 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
Usp47Q8BY87 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Usp47Q8BY87 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC32.7■■■□□ 2.82
Usp47Q8BY87 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC32.7■■■□□ 2.82
Usp47Q8BY87 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC32.69■■■□□ 2.82
Usp47Q8BY87 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Usp47Q8BY87 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Usp47Q8BY87 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
Usp47Q8BY87 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Usp47Q8BY87 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Usp47Q8BY87 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC32.68■■■□□ 2.82
Usp47Q8BY87 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Usp47Q8BY87 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Usp47Q8BY87 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC32.67■■■□□ 2.82
Usp47Q8BY87 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Usp47Q8BY87 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Usp47Q8BY87 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC32.66■■■□□ 2.82
Usp47Q8BY87 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
Usp47Q8BY87 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Usp47Q8BY87 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC32.64■■■□□ 2.82
Usp47Q8BY87 Gm12366-201ENSMUST00000121722 873 ntBASIC32.64■■■□□ 2.82
Usp47Q8BY87 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC32.64■■■□□ 2.82
Usp47Q8BY87 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC32.64■■■□□ 2.82
Usp47Q8BY87 Gm5786-201ENSMUST00000085368 882 ntBASIC32.64■■■□□ 2.82
Usp47Q8BY87 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Usp47Q8BY87 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Usp47Q8BY87 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Usp47Q8BY87 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Usp47Q8BY87 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Usp47Q8BY87 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC32.62■■■□□ 2.81
Usp47Q8BY87 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Usp47Q8BY87 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Usp47Q8BY87 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC32.61■■■□□ 2.81
Usp47Q8BY87 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Usp47Q8BY87 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Usp47Q8BY87 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
Usp47Q8BY87 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Usp47Q8BY87 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Usp47Q8BY87 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Usp47Q8BY87 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Usp47Q8BY87 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
Usp47Q8BY87 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
Usp47Q8BY87 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Usp47Q8BY87 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
Usp47Q8BY87 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Usp47Q8BY87 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC32.57■■■□□ 2.8
Usp47Q8BY87 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC32.56■■■□□ 2.8
Usp47Q8BY87 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Usp47Q8BY87 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Usp47Q8BY87 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Usp47Q8BY87 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC32.55■■■□□ 2.8
Usp47Q8BY87 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Usp47Q8BY87 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Usp47Q8BY87 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Usp47Q8BY87 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
Usp47Q8BY87 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Usp47Q8BY87 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC32.54■■■□□ 2.8
Usp47Q8BY87 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Usp47Q8BY87 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Usp47Q8BY87 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Usp47Q8BY87 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Usp47Q8BY87 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC32.52■■■□□ 2.8
Usp47Q8BY87 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Usp47Q8BY87 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.52■■■□□ 2.8
Usp47Q8BY87 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Usp47Q8BY87 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC32.51■■■□□ 2.8
Usp47Q8BY87 Gm14523-201ENSMUST00000117260 558 ntBASIC32.51■■■□□ 2.79
Usp47Q8BY87 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC32.5■■■□□ 2.79
Usp47Q8BY87 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Usp47Q8BY87 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Usp47Q8BY87 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
Usp47Q8BY87 AC153890.1-201ENSMUST00000220021 2469 ntBASIC32.49■■■□□ 2.79
Usp47Q8BY87 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
Usp47Q8BY87 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Usp47Q8BY87 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC32.47■■■□□ 2.79
Usp47Q8BY87 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC32.47■■■□□ 2.79
Usp47Q8BY87 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Usp47Q8BY87 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Usp47Q8BY87 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Usp47Q8BY87 Gm7332-201ENSMUST00000118351 454 ntBASIC32.46■■■□□ 2.79
Usp47Q8BY87 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Usp47Q8BY87 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Usp47Q8BY87 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Usp47Q8BY87 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Usp47Q8BY87 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Usp47Q8BY87 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
Usp47Q8BY87 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Usp47Q8BY87 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Usp47Q8BY87 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC32.43■■■□□ 2.78
Usp47Q8BY87 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC32.42■■■□□ 2.78
Usp47Q8BY87 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
Usp47Q8BY87 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Usp47Q8BY87 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms