Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.65■□□□□ 0.74
Ttc28Q80XJ3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Ttc28Q80XJ3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc28Q80XJ3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc28Q80XJ3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ttc28Q80XJ3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ttc28Q80XJ3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc28Q80XJ3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.64■□□□□ 0.73
Ttc28Q80XJ3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ttc28Q80XJ3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
Ttc28Q80XJ3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc28Q80XJ3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc28Q80XJ3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc28Q80XJ3 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.61■□□□□ 0.73
Ttc28Q80XJ3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc28Q80XJ3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc28Q80XJ3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc28Q80XJ3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc28Q80XJ3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.6■□□□□ 0.73
Ttc28Q80XJ3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.6■□□□□ 0.73
Ttc28Q80XJ3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc28Q80XJ3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.59■□□□□ 0.73
Ttc28Q80XJ3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc28Q80XJ3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.59■□□□□ 0.73
Ttc28Q80XJ3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc28Q80XJ3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ttc28Q80XJ3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.58■□□□□ 0.73
Ttc28Q80XJ3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc28Q80XJ3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc28Q80XJ3 Serp2-204ENSMUST00000228055 705 ntBASIC19.58■□□□□ 0.72
Ttc28Q80XJ3 Gm15820-201ENSMUST00000201566 728 ntBASIC19.57■□□□□ 0.72
Ttc28Q80XJ3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ttc28Q80XJ3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.57■□□□□ 0.72
Ttc28Q80XJ3 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.57■□□□□ 0.72
Ttc28Q80XJ3 Gm44428-201ENSMUST00000204474 874 ntBASIC19.57■□□□□ 0.72
Ttc28Q80XJ3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ttc28Q80XJ3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc28Q80XJ3 Gm14117-201ENSMUST00000122417 843 ntBASIC19.56■□□□□ 0.72
Ttc28Q80XJ3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc28Q80XJ3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc28Q80XJ3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc28Q80XJ3 Gm9959-201ENSMUST00000068277 390 ntBASIC19.55■□□□□ 0.72
Ttc28Q80XJ3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.54■□□□□ 0.72
Ttc28Q80XJ3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc28Q80XJ3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc28Q80XJ3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc28Q80XJ3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc28Q80XJ3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc28Q80XJ3 Zxda-201ENSMUST00000117281 2621 ntBASIC19.53■□□□□ 0.72
Ttc28Q80XJ3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.53■□□□□ 0.72
Ttc28Q80XJ3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc28Q80XJ3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc28Q80XJ3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ttc28Q80XJ3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc28Q80XJ3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc28Q80XJ3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc28Q80XJ3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.52■□□□□ 0.71
Ttc28Q80XJ3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ttc28Q80XJ3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.5■□□□□ 0.71
Ttc28Q80XJ3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.5■□□□□ 0.71
Ttc28Q80XJ3 Gm45444-201ENSMUST00000211394 898 ntBASIC19.5■□□□□ 0.71
Ttc28Q80XJ3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Ttc28Q80XJ3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ttc28Q80XJ3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Ttc28Q80XJ3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ttc28Q80XJ3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ttc28Q80XJ3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.49■□□□□ 0.71
Ttc28Q80XJ3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ttc28Q80XJ3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ttc28Q80XJ3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ttc28Q80XJ3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc28Q80XJ3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc28Q80XJ3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.48■□□□□ 0.71
Ttc28Q80XJ3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc28Q80XJ3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc28Q80XJ3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc28Q80XJ3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc28Q80XJ3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc28Q80XJ3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ttc28Q80XJ3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc28Q80XJ3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.46■□□□□ 0.71
Ttc28Q80XJ3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ttc28Q80XJ3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.46■□□□□ 0.71
Ttc28Q80XJ3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ttc28Q80XJ3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc28Q80XJ3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.45■□□□□ 0.7
Ttc28Q80XJ3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc28Q80XJ3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ttc28Q80XJ3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ttc28Q80XJ3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc28Q80XJ3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ttc28Q80XJ3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc28Q80XJ3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms