Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rps24-207ENSMUST00000224568 714 ntBASIC23.68■■□□□ 1.38
Prpf38bQ80SY5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prpf38bQ80SY5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf38bQ80SY5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf38bQ80SY5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf38bQ80SY5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Prpf38bQ80SY5 Gm30023-201ENSMUST00000197970 889 ntBASIC23.66■■□□□ 1.38
Prpf38bQ80SY5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prpf38bQ80SY5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf38bQ80SY5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prpf38bQ80SY5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf38bQ80SY5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf38bQ80SY5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.64■■□□□ 1.37
Prpf38bQ80SY5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
Prpf38bQ80SY5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf38bQ80SY5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf38bQ80SY5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prpf38bQ80SY5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf38bQ80SY5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf38bQ80SY5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.6■■□□□ 1.37
Prpf38bQ80SY5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.6■■□□□ 1.37
Prpf38bQ80SY5 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.6■■□□□ 1.37
Prpf38bQ80SY5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
Prpf38bQ80SY5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prpf38bQ80SY5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Prpf38bQ80SY5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
Prpf38bQ80SY5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Prpf38bQ80SY5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Prpf38bQ80SY5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Prpf38bQ80SY5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Prpf38bQ80SY5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Prpf38bQ80SY5 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.57■■□□□ 1.36
Prpf38bQ80SY5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.56■■□□□ 1.36
Prpf38bQ80SY5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Prpf38bQ80SY5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prpf38bQ80SY5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.55■■□□□ 1.36
Prpf38bQ80SY5 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.54■■□□□ 1.36
Prpf38bQ80SY5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Prpf38bQ80SY5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf38bQ80SY5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf38bQ80SY5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf38bQ80SY5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf38bQ80SY5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf38bQ80SY5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf38bQ80SY5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf38bQ80SY5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf38bQ80SY5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.52■■□□□ 1.36
Prpf38bQ80SY5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf38bQ80SY5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf38bQ80SY5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf38bQ80SY5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf38bQ80SY5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf38bQ80SY5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf38bQ80SY5 Gm45102-201ENSMUST00000207427 857 ntBASIC23.51■■□□□ 1.35
Prpf38bQ80SY5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf38bQ80SY5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf38bQ80SY5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf38bQ80SY5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf38bQ80SY5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Prpf38bQ80SY5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf38bQ80SY5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf38bQ80SY5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf38bQ80SY5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf38bQ80SY5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf38bQ80SY5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Prpf38bQ80SY5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.48■■□□□ 1.35
Prpf38bQ80SY5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Prpf38bQ80SY5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Prpf38bQ80SY5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.47■■□□□ 1.35
Prpf38bQ80SY5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.47■■□□□ 1.35
Prpf38bQ80SY5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf38bQ80SY5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.47■■□□□ 1.35
Prpf38bQ80SY5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Prpf38bQ80SY5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf38bQ80SY5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.46■■□□□ 1.35
Prpf38bQ80SY5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf38bQ80SY5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf38bQ80SY5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Prpf38bQ80SY5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Prpf38bQ80SY5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf38bQ80SY5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Prpf38bQ80SY5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Prpf38bQ80SY5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Prpf38bQ80SY5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.44■■□□□ 1.34
Prpf38bQ80SY5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf38bQ80SY5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.43■■□□□ 1.34
Prpf38bQ80SY5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf38bQ80SY5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Prpf38bQ80SY5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf38bQ80SY5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf38bQ80SY5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms