Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rif1Q6PR54 Gm9812-201ENSMUST00000061934 968 ntBASIC19.77■□□□□ 0.76
Rif1Q6PR54 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rif1Q6PR54 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rif1Q6PR54 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.75■□□□□ 0.75
Rif1Q6PR54 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rif1Q6PR54 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.75■□□□□ 0.75
Rif1Q6PR54 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rif1Q6PR54 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rif1Q6PR54 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rif1Q6PR54 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rif1Q6PR54 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rif1Q6PR54 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rif1Q6PR54 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.72■□□□□ 0.75
Rif1Q6PR54 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rif1Q6PR54 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rif1Q6PR54 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rif1Q6PR54 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.71■□□□□ 0.75
Rif1Q6PR54 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rif1Q6PR54 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.7■□□□□ 0.74
Rif1Q6PR54 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.68■□□□□ 0.74
Rif1Q6PR54 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.68■□□□□ 0.74
Rif1Q6PR54 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rif1Q6PR54 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rif1Q6PR54 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.67■□□□□ 0.74
Rif1Q6PR54 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rif1Q6PR54 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.67■□□□□ 0.74
Rif1Q6PR54 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rif1Q6PR54 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rif1Q6PR54 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rif1Q6PR54 Gm37136-201ENSMUST00000194368 194 ntBASIC19.66■□□□□ 0.74
Rif1Q6PR54 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rif1Q6PR54 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rif1Q6PR54 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.66■□□□□ 0.74
Rif1Q6PR54 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Rif1Q6PR54 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rif1Q6PR54 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.65■□□□□ 0.74
Rif1Q6PR54 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rif1Q6PR54 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rif1Q6PR54 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rif1Q6PR54 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.63■□□□□ 0.73
Rif1Q6PR54 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.63■□□□□ 0.73
Rif1Q6PR54 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.63■□□□□ 0.73
Rif1Q6PR54 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rif1Q6PR54 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rif1Q6PR54 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rif1Q6PR54 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rif1Q6PR54 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rif1Q6PR54 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rif1Q6PR54 Gm12922-201ENSMUST00000120626 809 ntBASIC19.61■□□□□ 0.73
Rif1Q6PR54 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rif1Q6PR54 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rif1Q6PR54 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rif1Q6PR54 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rif1Q6PR54 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.6■□□□□ 0.73
Rif1Q6PR54 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rif1Q6PR54 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.59■□□□□ 0.73
Rif1Q6PR54 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rif1Q6PR54 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rif1Q6PR54 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rif1Q6PR54 Gm7417-201ENSMUST00000192950 473 ntBASIC19.59■□□□□ 0.73
Rif1Q6PR54 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.59■□□□□ 0.73
Rif1Q6PR54 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rif1Q6PR54 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rif1Q6PR54 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rif1Q6PR54 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rif1Q6PR54 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rif1Q6PR54 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rif1Q6PR54 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.57■□□□□ 0.72
Rif1Q6PR54 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Gm27454-201ENSMUST00000185090 204 ntBASIC19.56■□□□□ 0.72
Rif1Q6PR54 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rif1Q6PR54 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Rif1Q6PR54 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.56■□□□□ 0.72
Rif1Q6PR54 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.55■□□□□ 0.72
Rif1Q6PR54 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Rif1Q6PR54 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rif1Q6PR54 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rif1Q6PR54 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rif1Q6PR54 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rif1Q6PR54 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms