Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL54Q6P161 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL54Q6P161 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.73■□□□□ 0.59
MRPL54Q6P161 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL54Q6P161 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL54Q6P161 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL54Q6P161 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL54Q6P161 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.72■□□□□ 0.59
MRPL54Q6P161 AC100797.4-201ENST00000631653 1827 ntBASIC18.72■□□□□ 0.59
MRPL54Q6P161 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPL54Q6P161 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL54Q6P161 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPL54Q6P161 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL54Q6P161 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL54Q6P161 AC092803.2-201ENST00000564287 1899 ntBASIC18.7■□□□□ 0.58
MRPL54Q6P161 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPL54Q6P161 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL54Q6P161 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL54Q6P161 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL54Q6P161 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL54Q6P161 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL54Q6P161 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.69■□□□□ 0.58
MRPL54Q6P161 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MRPL54Q6P161 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL54Q6P161 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MRPL54Q6P161 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL54Q6P161 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL54Q6P161 DYNLL1-208ENST00000550178 581 ntBASIC18.68■□□□□ 0.58
MRPL54Q6P161 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MRPL54Q6P161 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL54Q6P161 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MRPL54Q6P161 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.68■□□□□ 0.58
MRPL54Q6P161 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL54Q6P161 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL54Q6P161 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL54Q6P161 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL54Q6P161 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.66■□□□□ 0.58
MRPL54Q6P161 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL54Q6P161 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL54Q6P161 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL54Q6P161 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL54Q6P161 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MRPL54Q6P161 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL54Q6P161 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL54Q6P161 AP002414.2-202ENST00000590929 1450 ntBASIC18.65■□□□□ 0.58
MRPL54Q6P161 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
MRPL54Q6P161 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MRPL54Q6P161 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
MRPL54Q6P161 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL54Q6P161 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL54Q6P161 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL54Q6P161 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL54Q6P161 AC127502.1-201ENST00000399971 1502 ntBASIC18.64■□□□□ 0.57
MRPL54Q6P161 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL54Q6P161 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL54Q6P161 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL54Q6P161 AC006077.2-201ENST00000623591 457 ntBASIC18.63■□□□□ 0.57
MRPL54Q6P161 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL54Q6P161 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL54Q6P161 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL54Q6P161 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.63■□□□□ 0.57
MRPL54Q6P161 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MRPL54Q6P161 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
MRPL54Q6P161 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL54Q6P161 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MRPL54Q6P161 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MRPL54Q6P161 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL54Q6P161 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MRPL54Q6P161 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL54Q6P161 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL54Q6P161 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL54Q6P161 ERN1-208ENST00000606895 2068 ntBASIC18.61■□□□□ 0.57
MRPL54Q6P161 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL54Q6P161 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL54Q6P161 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL54Q6P161 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL54Q6P161 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL54Q6P161 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL54Q6P161 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL54Q6P161 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL54Q6P161 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MRPL54Q6P161 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL54Q6P161 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL54Q6P161 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL54Q6P161 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL54Q6P161 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL54Q6P161 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL54Q6P161 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
MRPL54Q6P161 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.58■□□□□ 0.57
MRPL54Q6P161 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL54Q6P161 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL54Q6P161 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL54Q6P161 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL54Q6P161 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms