Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga7Q6DD96 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga7Q6DD96 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga7Q6DD96 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga7Q6DD96 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga7Q6DD96 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga7Q6DD96 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.99■■□□□ 1.11
Pcdhga7Q6DD96 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga7Q6DD96 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga7Q6DD96 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhga7Q6DD96 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhga7Q6DD96 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga7Q6DD96 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.98■■□□□ 1.11
Pcdhga7Q6DD96 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga7Q6DD96 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga7Q6DD96 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.97■■□□□ 1.11
Pcdhga7Q6DD96 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pcdhga7Q6DD96 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 Gm6821-201ENSMUST00000107540 542 ntBASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga7Q6DD96 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga7Q6DD96 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga7Q6DD96 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhga7Q6DD96 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga7Q6DD96 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga7Q6DD96 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga7Q6DD96 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga7Q6DD96 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga7Q6DD96 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga7Q6DD96 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga7Q6DD96 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pcdhga7Q6DD96 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga7Q6DD96 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhga7Q6DD96 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga7Q6DD96 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga7Q6DD96 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga7Q6DD96 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.9■■□□□ 1.1
Pcdhga7Q6DD96 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga7Q6DD96 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhga7Q6DD96 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga7Q6DD96 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga7Q6DD96 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga7Q6DD96 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga7Q6DD96 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga7Q6DD96 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga7Q6DD96 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga7Q6DD96 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.86■■□□□ 1.09
Pcdhga7Q6DD96 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.85■■□□□ 1.09
Pcdhga7Q6DD96 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga7Q6DD96 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga7Q6DD96 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga7Q6DD96 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga7Q6DD96 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcdhga7Q6DD96 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga7Q6DD96 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga7Q6DD96 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhga7Q6DD96 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga7Q6DD96 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga7Q6DD96 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.82■■□□□ 1.08
Pcdhga7Q6DD96 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga7Q6DD96 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Gm8503-201ENSMUST00000118131 455 ntBASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga7Q6DD96 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhga7Q6DD96 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhga7Q6DD96 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhga7Q6DD96 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhga7Q6DD96 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhga7Q6DD96 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhga7Q6DD96 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhga7Q6DD96 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 177.8 ms