Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scnn1aQ61180 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Scnn1aQ61180 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.61■■□□□ 1.85
Scnn1aQ61180 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Scnn1aQ61180 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Scnn1aQ61180 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.6■■□□□ 1.85
Scnn1aQ61180 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.6■■□□□ 1.85
Scnn1aQ61180 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Scnn1aQ61180 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.59■■□□□ 1.85
Scnn1aQ61180 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scnn1aQ61180 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.59■■□□□ 1.85
Scnn1aQ61180 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Scnn1aQ61180 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.58■■□□□ 1.85
Scnn1aQ61180 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scnn1aQ61180 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Scnn1aQ61180 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.56■■□□□ 1.84
Scnn1aQ61180 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Scnn1aQ61180 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Scnn1aQ61180 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scnn1aQ61180 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scnn1aQ61180 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Scnn1aQ61180 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scnn1aQ61180 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scnn1aQ61180 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scnn1aQ61180 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scnn1aQ61180 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.54■■□□□ 1.84
Scnn1aQ61180 Gm44428-201ENSMUST00000204474 874 ntBASIC26.54■■□□□ 1.84
Scnn1aQ61180 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Scnn1aQ61180 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.53■■□□□ 1.84
Scnn1aQ61180 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
Scnn1aQ61180 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Scnn1aQ61180 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scnn1aQ61180 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Scnn1aQ61180 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scnn1aQ61180 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scnn1aQ61180 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scnn1aQ61180 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.5■■□□□ 1.83
Scnn1aQ61180 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scnn1aQ61180 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scnn1aQ61180 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scnn1aQ61180 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.5■■□□□ 1.83
Scnn1aQ61180 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scnn1aQ61180 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Scnn1aQ61180 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scnn1aQ61180 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.49■■□□□ 1.83
Scnn1aQ61180 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scnn1aQ61180 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scnn1aQ61180 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Scnn1aQ61180 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Scnn1aQ61180 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Scnn1aQ61180 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scnn1aQ61180 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Scnn1aQ61180 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.47■■□□□ 1.83
Scnn1aQ61180 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Scnn1aQ61180 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scnn1aQ61180 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scnn1aQ61180 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scnn1aQ61180 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Scnn1aQ61180 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Scnn1aQ61180 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Scnn1aQ61180 Gm10420-201ENSMUST00000121713 882 ntBASIC26.45■■□□□ 1.82
Scnn1aQ61180 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scnn1aQ61180 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.44■■□□□ 1.82
Scnn1aQ61180 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Scnn1aQ61180 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scnn1aQ61180 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.43■■□□□ 1.82
Scnn1aQ61180 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.43■■□□□ 1.82
Scnn1aQ61180 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Scnn1aQ61180 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scnn1aQ61180 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Scnn1aQ61180 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Scnn1aQ61180 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Scnn1aQ61180 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Scnn1aQ61180 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Scnn1aQ61180 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scnn1aQ61180 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Scnn1aQ61180 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scnn1aQ61180 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scnn1aQ61180 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Scnn1aQ61180 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scnn1aQ61180 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Scnn1aQ61180 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.39■■□□□ 1.82
Scnn1aQ61180 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.39■■□□□ 1.82
Scnn1aQ61180 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Scnn1aQ61180 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
Scnn1aQ61180 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scnn1aQ61180 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.38■■□□□ 1.81
Scnn1aQ61180 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scnn1aQ61180 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Scnn1aQ61180 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Scnn1aQ61180 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scnn1aQ61180 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scnn1aQ61180 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scnn1aQ61180 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Scnn1aQ61180 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scnn1aQ61180 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scnn1aQ61180 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scnn1aQ61180 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scnn1aQ61180 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Scnn1aQ61180 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms