Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scarb1Q61009 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scarb1Q61009 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scarb1Q61009 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scarb1Q61009 Particl-201ENSMUST00000205370 1560 ntBASIC19.06■□□□□ 0.64
Scarb1Q61009 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scarb1Q61009 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Scarb1Q61009 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scarb1Q61009 Zfp131-205ENSMUST00000223812 663 ntBASIC19.06■□□□□ 0.64
Scarb1Q61009 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.05■□□□□ 0.64
Scarb1Q61009 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Scarb1Q61009 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.05■□□□□ 0.64
Scarb1Q61009 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.05■□□□□ 0.64
Scarb1Q61009 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scarb1Q61009 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scarb1Q61009 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Scarb1Q61009 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scarb1Q61009 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.05■□□□□ 0.64
Scarb1Q61009 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Scarb1Q61009 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.04■□□□□ 0.64
Scarb1Q61009 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scarb1Q61009 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scarb1Q61009 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scarb1Q61009 Gm30023-201ENSMUST00000197970 889 ntBASIC19.04■□□□□ 0.64
Scarb1Q61009 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.04■□□□□ 0.64
Scarb1Q61009 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scarb1Q61009 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Scarb1Q61009 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.03■□□□□ 0.64
Scarb1Q61009 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scarb1Q61009 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scarb1Q61009 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.02■□□□□ 0.64
Scarb1Q61009 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scarb1Q61009 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Scarb1Q61009 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scarb1Q61009 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scarb1Q61009 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scarb1Q61009 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scarb1Q61009 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scarb1Q61009 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Scarb1Q61009 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scarb1Q61009 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scarb1Q61009 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Scarb1Q61009 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scarb1Q61009 Gm24970-201ENSMUST00000175582 82 ntBASIC18.99■□□□□ 0.63
Scarb1Q61009 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scarb1Q61009 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scarb1Q61009 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scarb1Q61009 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scarb1Q61009 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scarb1Q61009 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scarb1Q61009 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Scarb1Q61009 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.98■□□□□ 0.63
Scarb1Q61009 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scarb1Q61009 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scarb1Q61009 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scarb1Q61009 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.97■□□□□ 0.63
Scarb1Q61009 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Scarb1Q61009 Gm9397-201ENSMUST00000200125 605 ntBASIC18.97■□□□□ 0.63
Scarb1Q61009 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scarb1Q61009 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scarb1Q61009 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scarb1Q61009 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scarb1Q61009 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.96■□□□□ 0.63
Scarb1Q61009 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Scarb1Q61009 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scarb1Q61009 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scarb1Q61009 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scarb1Q61009 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scarb1Q61009 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scarb1Q61009 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scarb1Q61009 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scarb1Q61009 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scarb1Q61009 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scarb1Q61009 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scarb1Q61009 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scarb1Q61009 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scarb1Q61009 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scarb1Q61009 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scarb1Q61009 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scarb1Q61009 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scarb1Q61009 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scarb1Q61009 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scarb1Q61009 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scarb1Q61009 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scarb1Q61009 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scarb1Q61009 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scarb1Q61009 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scarb1Q61009 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scarb1Q61009 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scarb1Q61009 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scarb1Q61009 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scarb1Q61009 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scarb1Q61009 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scarb1Q61009 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms