Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRK2Q5S007 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRK2Q5S007 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRK2Q5S007 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 AL031848.2-201ENST00000607670 837 ntBASIC22.3■■□□□ 1.16
LRRK2Q5S007 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRK2Q5S007 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRK2Q5S007 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.3■■□□□ 1.16
LRRK2Q5S007 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 PVT1_1.1-201ENST00000615125 194 ntBASIC22.29■■□□□ 1.16
LRRK2Q5S007 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRK2Q5S007 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
LRRK2Q5S007 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.29■■□□□ 1.16
LRRK2Q5S007 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRK2Q5S007 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRK2Q5S007 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.26■■□□□ 1.15
LRRK2Q5S007 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
LRRK2Q5S007 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 AL161658.1-201ENST00000623641 1967 ntBASIC22.25■■□□□ 1.15
LRRK2Q5S007 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRK2Q5S007 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRK2Q5S007 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.25■■□□□ 1.15
LRRK2Q5S007 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRK2Q5S007 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LRRK2Q5S007 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
LRRK2Q5S007 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRK2Q5S007 AC120057.4-201ENST00000624722 1615 ntBASIC22.23■■□□□ 1.15
LRRK2Q5S007 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
LRRK2Q5S007 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRRK2Q5S007 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LRRK2Q5S007 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
LRRK2Q5S007 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
LRRK2Q5S007 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.21■■□□□ 1.15
LRRK2Q5S007 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
LRRK2Q5S007 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRK2Q5S007 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRK2Q5S007 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
LRRK2Q5S007 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.2■■□□□ 1.14
LRRK2Q5S007 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRK2Q5S007 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRK2Q5S007 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRK2Q5S007 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.2■■□□□ 1.14
LRRK2Q5S007 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRK2Q5S007 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LRRK2Q5S007 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.19■■□□□ 1.14
LRRK2Q5S007 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
LRRK2Q5S007 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRRK2Q5S007 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRK2Q5S007 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRK2Q5S007 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LRRK2Q5S007 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRK2Q5S007 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRK2Q5S007 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
LRRK2Q5S007 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
LRRK2Q5S007 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRK2Q5S007 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRK2Q5S007 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.16■■□□□ 1.14
LRRK2Q5S007 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRRK2Q5S007 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.14■■□□□ 1.14
LRRK2Q5S007 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRK2Q5S007 AL359258.2-201ENST00000564063 1566 ntBASIC22.13■■□□□ 1.13
LRRK2Q5S007 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRRK2Q5S007 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.13■■□□□ 1.13
LRRK2Q5S007 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.12■■□□□ 1.13
LRRK2Q5S007 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRK2Q5S007 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.12■■□□□ 1.13
LRRK2Q5S007 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.11■■□□□ 1.13
LRRK2Q5S007 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRRK2Q5S007 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms