Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q56UQ5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Q56UQ5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Q56UQ5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q56UQ5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q56UQ5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Q56UQ5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.56■□□□□ 0.72
Q56UQ5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.56■□□□□ 0.72
Q56UQ5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q56UQ5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q56UQ5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q56UQ5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Q56UQ5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q56UQ5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Q56UQ5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q56UQ5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q56UQ5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q56UQ5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Q56UQ5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q56UQ5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q56UQ5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Q56UQ5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Q56UQ5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q56UQ5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q56UQ5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.52■□□□□ 0.72
Q56UQ5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q56UQ5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q56UQ5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Q56UQ5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q56UQ5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.52■□□□□ 0.72
Q56UQ5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Q56UQ5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Q56UQ5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.52■□□□□ 0.72
Q56UQ5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q56UQ5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Q56UQ5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.51■□□□□ 0.71
Q56UQ5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q56UQ5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.51■□□□□ 0.71
Q56UQ5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.51■□□□□ 0.71
Q56UQ5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q56UQ5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q56UQ5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.51■□□□□ 0.71
Q56UQ5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.5■□□□□ 0.71
Q56UQ5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q56UQ5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q56UQ5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Q56UQ5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q56UQ5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.49■□□□□ 0.71
Q56UQ5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Q56UQ5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.49■□□□□ 0.71
Q56UQ5 LINC01971-201ENST00000617888 1048 ntBASIC19.49■□□□□ 0.71
Q56UQ5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Q56UQ5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Q56UQ5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q56UQ5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q56UQ5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.48■□□□□ 0.71
Q56UQ5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Q56UQ5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.48■□□□□ 0.71
Q56UQ5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Q56UQ5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Q56UQ5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q56UQ5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.47■□□□□ 0.71
Q56UQ5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.47■□□□□ 0.71
Q56UQ5 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.47■□□□□ 0.71
Q56UQ5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q56UQ5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q56UQ5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q56UQ5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q56UQ5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Q56UQ5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.46■□□□□ 0.71
Q56UQ5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.46■□□□□ 0.71
Q56UQ5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q56UQ5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Q56UQ5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.45■□□□□ 0.7
Q56UQ5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q56UQ5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.45■□□□□ 0.7
Q56UQ5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.45■□□□□ 0.7
Q56UQ5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Q56UQ5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q56UQ5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.44■□□□□ 0.7
Q56UQ5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q56UQ5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Q56UQ5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q56UQ5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q56UQ5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.43■□□□□ 0.7
Q56UQ5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 1257.1 ms