Protein–RNA interactions for Protein: Q4VAB4

Cnpy1, Protein canopy homolog 1, mousemouse

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnpy1Q4VAB4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnpy1Q4VAB4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnpy1Q4VAB4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cnpy1Q4VAB4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnpy1Q4VAB4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cnpy1Q4VAB4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnpy1Q4VAB4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.29■□□□□ 0.84
Cnpy1Q4VAB4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnpy1Q4VAB4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cnpy1Q4VAB4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnpy1Q4VAB4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Cnpy1Q4VAB4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cnpy1Q4VAB4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnpy1Q4VAB4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnpy1Q4VAB4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.26■□□□□ 0.83
Cnpy1Q4VAB4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnpy1Q4VAB4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnpy1Q4VAB4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnpy1Q4VAB4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cnpy1Q4VAB4 Particl-201ENSMUST00000205370 1560 ntBASIC20.25■□□□□ 0.83
Cnpy1Q4VAB4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnpy1Q4VAB4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnpy1Q4VAB4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.22■□□□□ 0.83
Cnpy1Q4VAB4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cnpy1Q4VAB4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cnpy1Q4VAB4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cnpy1Q4VAB4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnpy1Q4VAB4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnpy1Q4VAB4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cnpy1Q4VAB4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnpy1Q4VAB4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.2■□□□□ 0.82
Cnpy1Q4VAB4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnpy1Q4VAB4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cnpy1Q4VAB4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnpy1Q4VAB4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cnpy1Q4VAB4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cnpy1Q4VAB4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cnpy1Q4VAB4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cnpy1Q4VAB4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cnpy1Q4VAB4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cnpy1Q4VAB4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cnpy1Q4VAB4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cnpy1Q4VAB4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cnpy1Q4VAB4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.15■□□□□ 0.82
Cnpy1Q4VAB4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cnpy1Q4VAB4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cnpy1Q4VAB4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cnpy1Q4VAB4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cnpy1Q4VAB4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cnpy1Q4VAB4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cnpy1Q4VAB4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cnpy1Q4VAB4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cnpy1Q4VAB4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cnpy1Q4VAB4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.13■□□□□ 0.81
Cnpy1Q4VAB4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cnpy1Q4VAB4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Cnpy1Q4VAB4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cnpy1Q4VAB4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cnpy1Q4VAB4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cnpy1Q4VAB4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cnpy1Q4VAB4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cnpy1Q4VAB4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cnpy1Q4VAB4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cnpy1Q4VAB4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.1■□□□□ 0.81
Cnpy1Q4VAB4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cnpy1Q4VAB4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cnpy1Q4VAB4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnpy1Q4VAB4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnpy1Q4VAB4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cnpy1Q4VAB4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cnpy1Q4VAB4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cnpy1Q4VAB4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cnpy1Q4VAB4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cnpy1Q4VAB4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cnpy1Q4VAB4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnpy1Q4VAB4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnpy1Q4VAB4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cnpy1Q4VAB4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnpy1Q4VAB4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnpy1Q4VAB4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnpy1Q4VAB4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms