Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.89■■■□□ 2.06
TRIM60Q495X7 AC025884.2-201ENST00000553429 711 ntBASIC27.89■■■□□ 2.06
TRIM60Q495X7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
TRIM60Q495X7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TRIM60Q495X7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.88■■■□□ 2.05
TRIM60Q495X7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.88■■■□□ 2.05
TRIM60Q495X7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.88■■■□□ 2.05
TRIM60Q495X7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.88■■■□□ 2.05
TRIM60Q495X7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TRIM60Q495X7 AC074183.2-201ENST00000623112 922 ntBASIC27.87■■■□□ 2.05
TRIM60Q495X7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TRIM60Q495X7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.87■■■□□ 2.05
TRIM60Q495X7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
TRIM60Q495X7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.86■■■□□ 2.05
TRIM60Q495X7 AC093536.1-201ENST00000569153 554 ntBASIC27.86■■■□□ 2.05
TRIM60Q495X7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.86■■■□□ 2.05
TRIM60Q495X7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.85■■■□□ 2.05
TRIM60Q495X7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
TRIM60Q495X7 AC103834.1-201ENST00000520383 144 ntBASIC27.85■■■□□ 2.05
TRIM60Q495X7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
TRIM60Q495X7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
TRIM60Q495X7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.85■■■□□ 2.05
TRIM60Q495X7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TRIM60Q495X7 RAP2CP1-202ENST00000605179 643 ntBASIC27.84■■■□□ 2.05
TRIM60Q495X7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TRIM60Q495X7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.83■■■□□ 2.05
TRIM60Q495X7 YBX1P4-201ENST00000392794 808 ntBASIC27.83■■■□□ 2.05
TRIM60Q495X7 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.83■■■□□ 2.05
TRIM60Q495X7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.83■■■□□ 2.05
TRIM60Q495X7 AC139795.1-202ENST00000500444 432 ntBASIC27.83■■■□□ 2.05
TRIM60Q495X7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.83■■■□□ 2.05
TRIM60Q495X7 THA1P-201ENST00000590384 1145 ntBASIC27.83■■■□□ 2.05
TRIM60Q495X7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TRIM60Q495X7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.83■■■□□ 2.05
TRIM60Q495X7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
TRIM60Q495X7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TRIM60Q495X7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TRIM60Q495X7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TRIM60Q495X7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TRIM60Q495X7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.81■■■□□ 2.04
TRIM60Q495X7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TRIM60Q495X7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TRIM60Q495X7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
TRIM60Q495X7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
TRIM60Q495X7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TRIM60Q495X7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.8■■■□□ 2.04
TRIM60Q495X7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
TRIM60Q495X7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TRIM60Q495X7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
TRIM60Q495X7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.79■■■□□ 2.04
TRIM60Q495X7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
TRIM60Q495X7 GUSBP5-201ENST00000418136 578 ntBASIC27.79■■■□□ 2.04
TRIM60Q495X7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.79■■■□□ 2.04
TRIM60Q495X7 PVT1_1.1-201ENST00000615125 194 ntBASIC27.79■■■□□ 2.04
TRIM60Q495X7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
TRIM60Q495X7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
TRIM60Q495X7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM60Q495X7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM60Q495X7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.78■■■□□ 2.04
TRIM60Q495X7 MIR6765-201ENST00000614092 87 ntBASIC27.78■■■□□ 2.04
TRIM60Q495X7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRIM60Q495X7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.77■■■□□ 2.04
TRIM60Q495X7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TRIM60Q495X7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.76■■■□□ 2.03
TRIM60Q495X7 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.76■■■□□ 2.03
TRIM60Q495X7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRIM60Q495X7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRIM60Q495X7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM60Q495X7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM60Q495X7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
TRIM60Q495X7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM60Q495X7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIM60Q495X7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRIM60Q495X7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
TRIM60Q495X7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRIM60Q495X7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.74■■■□□ 2.03
TRIM60Q495X7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TRIM60Q495X7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.73■■■□□ 2.03
TRIM60Q495X7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRIM60Q495X7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
TRIM60Q495X7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.72■■■□□ 2.03
TRIM60Q495X7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TRIM60Q495X7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
TRIM60Q495X7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.71■■■□□ 2.03
TRIM60Q495X7 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.71■■■□□ 2.03
TRIM60Q495X7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TRIM60Q495X7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRIM60Q495X7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
TRIM60Q495X7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.7■■■□□ 2.02
TRIM60Q495X7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.7■■■□□ 2.02
TRIM60Q495X7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.7■■■□□ 2.02
TRIM60Q495X7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.7■■■□□ 2.02
TRIM60Q495X7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TRIM60Q495X7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
TRIM60Q495X7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
TRIM60Q495X7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TRIM60Q495X7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.68■■■□□ 2.02
TRIM60Q495X7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
TRIM60Q495X7 AC100797.4-201ENST00000631653 1827 ntBASIC27.68■■■□□ 2.02
TRIM60Q495X7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms