Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cdkl5Q3UTQ8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cdkl5Q3UTQ8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cdkl5Q3UTQ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Cdkl5Q3UTQ8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cdkl5Q3UTQ8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cdkl5Q3UTQ8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cdkl5Q3UTQ8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cdkl5Q3UTQ8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cdkl5Q3UTQ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.31■■□□□ 1.8
Cdkl5Q3UTQ8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cdkl5Q3UTQ8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cdkl5Q3UTQ8 Gm9812-201ENSMUST00000061934 968 ntBASIC26.3■■□□□ 1.8
Cdkl5Q3UTQ8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cdkl5Q3UTQ8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cdkl5Q3UTQ8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cdkl5Q3UTQ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cdkl5Q3UTQ8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cdkl5Q3UTQ8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Cdkl5Q3UTQ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cdkl5Q3UTQ8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cdkl5Q3UTQ8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cdkl5Q3UTQ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cdkl5Q3UTQ8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cdkl5Q3UTQ8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cdkl5Q3UTQ8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cdkl5Q3UTQ8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Cdkl5Q3UTQ8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.25■■□□□ 1.79
Cdkl5Q3UTQ8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cdkl5Q3UTQ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.25■■□□□ 1.79
Cdkl5Q3UTQ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cdkl5Q3UTQ8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cdkl5Q3UTQ8 Gm45364-201ENSMUST00000210883 159 ntBASIC26.24■■□□□ 1.79
Cdkl5Q3UTQ8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cdkl5Q3UTQ8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cdkl5Q3UTQ8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cdkl5Q3UTQ8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Cdkl5Q3UTQ8 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.23■■□□□ 1.79
Cdkl5Q3UTQ8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cdkl5Q3UTQ8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cdkl5Q3UTQ8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cdkl5Q3UTQ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Cdkl5Q3UTQ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.2■■□□□ 1.78
Cdkl5Q3UTQ8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Cdkl5Q3UTQ8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.19■■□□□ 1.78
Cdkl5Q3UTQ8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cdkl5Q3UTQ8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cdkl5Q3UTQ8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cdkl5Q3UTQ8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cdkl5Q3UTQ8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cdkl5Q3UTQ8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cdkl5Q3UTQ8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cdkl5Q3UTQ8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cdkl5Q3UTQ8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Cdkl5Q3UTQ8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
Cdkl5Q3UTQ8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cdkl5Q3UTQ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.17■■□□□ 1.78
Cdkl5Q3UTQ8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cdkl5Q3UTQ8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cdkl5Q3UTQ8 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.14■■□□□ 1.78
Cdkl5Q3UTQ8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Cdkl5Q3UTQ8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Cdkl5Q3UTQ8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Cdkl5Q3UTQ8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.14■■□□□ 1.77
Cdkl5Q3UTQ8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cdkl5Q3UTQ8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Cdkl5Q3UTQ8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Cdkl5Q3UTQ8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Cdkl5Q3UTQ8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cdkl5Q3UTQ8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cdkl5Q3UTQ8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Cdkl5Q3UTQ8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.1■■□□□ 1.77
Cdkl5Q3UTQ8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.1■■□□□ 1.77
Cdkl5Q3UTQ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cdkl5Q3UTQ8 Terc-201ENSMUST00000082862 423 ntBASIC26.09■■□□□ 1.77
Cdkl5Q3UTQ8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cdkl5Q3UTQ8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.08■■□□□ 1.77
Cdkl5Q3UTQ8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms