Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC34.64■■■■□ 3.14
Arhgef40Q3UPH7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Arhgef40Q3UPH7 Gm5921-201ENSMUST00000075898 882 ntBASIC34.62■■■■□ 3.13
Arhgef40Q3UPH7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Arhgef40Q3UPH7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC34.61■■■■□ 3.13
Arhgef40Q3UPH7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Arhgef40Q3UPH7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Arhgef40Q3UPH7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC34.6■■■■□ 3.13
Arhgef40Q3UPH7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC34.6■■■■□ 3.13
Arhgef40Q3UPH7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC34.6■■■■□ 3.13
Arhgef40Q3UPH7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC34.6■■■■□ 3.13
Arhgef40Q3UPH7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Arhgef40Q3UPH7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Arhgef40Q3UPH7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Arhgef40Q3UPH7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC34.58■■■■□ 3.13
Arhgef40Q3UPH7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Arhgef40Q3UPH7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Arhgef40Q3UPH7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
Arhgef40Q3UPH7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
Arhgef40Q3UPH7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC34.55■■■■□ 3.12
Arhgef40Q3UPH7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Arhgef40Q3UPH7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Arhgef40Q3UPH7 Gm4419-202ENSMUST00000226239 1431 ntBASIC34.53■■■■□ 3.12
Arhgef40Q3UPH7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC34.52■■■■□ 3.12
Arhgef40Q3UPH7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Arhgef40Q3UPH7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Arhgef40Q3UPH7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Arhgef40Q3UPH7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC34.51■■■■□ 3.11
Arhgef40Q3UPH7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Arhgef40Q3UPH7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Arhgef40Q3UPH7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Arhgef40Q3UPH7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Arhgef40Q3UPH7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Arhgef40Q3UPH7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Arhgef40Q3UPH7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC34.49■■■■□ 3.11
Arhgef40Q3UPH7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Arhgef40Q3UPH7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Arhgef40Q3UPH7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Arhgef40Q3UPH7 Gm44428-201ENSMUST00000204474 874 ntBASIC34.45■■■■□ 3.1
Arhgef40Q3UPH7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Arhgef40Q3UPH7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC34.44■■■■□ 3.1
Arhgef40Q3UPH7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC34.44■■■■□ 3.1
Arhgef40Q3UPH7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Arhgef40Q3UPH7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC34.44■■■■□ 3.1
Arhgef40Q3UPH7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC34.43■■■■□ 3.1
Arhgef40Q3UPH7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC34.43■■■■□ 3.1
Arhgef40Q3UPH7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Arhgef40Q3UPH7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Arhgef40Q3UPH7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Arhgef40Q3UPH7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Arhgef40Q3UPH7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Arhgef40Q3UPH7 Gm15546-201ENSMUST00000122095 826 ntBASIC34.39■■■■□ 3.1
Arhgef40Q3UPH7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Arhgef40Q3UPH7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC34.38■■■■□ 3.09
Arhgef40Q3UPH7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
Arhgef40Q3UPH7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Arhgef40Q3UPH7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Arhgef40Q3UPH7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Arhgef40Q3UPH7 Gm5522-201ENSMUST00000189483 1242 ntBASIC34.36■■■■□ 3.09
Arhgef40Q3UPH7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Arhgef40Q3UPH7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
Arhgef40Q3UPH7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Arhgef40Q3UPH7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Arhgef40Q3UPH7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
Arhgef40Q3UPH7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Arhgef40Q3UPH7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Arhgef40Q3UPH7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
Arhgef40Q3UPH7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC34.33■■■■□ 3.09
Arhgef40Q3UPH7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Arhgef40Q3UPH7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Arhgef40Q3UPH7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Arhgef40Q3UPH7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Arhgef40Q3UPH7 Gm13238-201ENSMUST00000117655 780 ntBASIC34.28■■■■□ 3.08
Arhgef40Q3UPH7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC34.27■■■■□ 3.08
Arhgef40Q3UPH7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
Arhgef40Q3UPH7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
Arhgef40Q3UPH7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Arhgef40Q3UPH7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Arhgef40Q3UPH7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC34.26■■■■□ 3.07
Arhgef40Q3UPH7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC34.26■■■■□ 3.07
Arhgef40Q3UPH7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Arhgef40Q3UPH7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Arhgef40Q3UPH7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Arhgef40Q3UPH7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Arhgef40Q3UPH7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC34.25■■■■□ 3.07
Arhgef40Q3UPH7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC34.25■■■■□ 3.07
Arhgef40Q3UPH7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Arhgef40Q3UPH7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Arhgef40Q3UPH7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Arhgef40Q3UPH7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Arhgef40Q3UPH7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC34.24■■■■□ 3.07
Arhgef40Q3UPH7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
Arhgef40Q3UPH7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC34.23■■■■□ 3.07
Arhgef40Q3UPH7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC34.23■■■■□ 3.07
Arhgef40Q3UPH7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Arhgef40Q3UPH7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Arhgef40Q3UPH7 Gm43592-201ENSMUST00000196922 1165 ntBASIC34.22■■■■□ 3.07
Arhgef40Q3UPH7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Arhgef40Q3UPH7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.06
Arhgef40Q3UPH7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC34.19■■■■□ 3.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms