Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Puf60Q3UEB3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Puf60Q3UEB3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Puf60Q3UEB3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC32.02■■■□□ 2.72
Puf60Q3UEB3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Puf60Q3UEB3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Puf60Q3UEB3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC32■■■□□ 2.71
Puf60Q3UEB3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.99■■■□□ 2.71
Puf60Q3UEB3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Puf60Q3UEB3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
Puf60Q3UEB3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
Puf60Q3UEB3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Puf60Q3UEB3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
Puf60Q3UEB3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Puf60Q3UEB3 Gm44428-201ENSMUST00000204474 874 ntBASIC31.94■■■□□ 2.7
Puf60Q3UEB3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.94■■■□□ 2.7
Puf60Q3UEB3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Puf60Q3UEB3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC31.93■■■□□ 2.7
Puf60Q3UEB3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Puf60Q3UEB3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Puf60Q3UEB3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Puf60Q3UEB3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Puf60Q3UEB3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.91■■■□□ 2.7
Puf60Q3UEB3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Puf60Q3UEB3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
Puf60Q3UEB3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.9■■■□□ 2.7
Puf60Q3UEB3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Puf60Q3UEB3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Puf60Q3UEB3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Puf60Q3UEB3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Puf60Q3UEB3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Puf60Q3UEB3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Puf60Q3UEB3 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.87■■■□□ 2.69
Puf60Q3UEB3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Puf60Q3UEB3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.87■■■□□ 2.69
Puf60Q3UEB3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.87■■■□□ 2.69
Puf60Q3UEB3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.86■■■□□ 2.69
Puf60Q3UEB3 Gm5921-201ENSMUST00000075898 882 ntBASIC31.86■■■□□ 2.69
Puf60Q3UEB3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Puf60Q3UEB3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Puf60Q3UEB3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Puf60Q3UEB3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Puf60Q3UEB3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Puf60Q3UEB3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Puf60Q3UEB3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Puf60Q3UEB3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Puf60Q3UEB3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Puf60Q3UEB3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
Puf60Q3UEB3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Puf60Q3UEB3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Puf60Q3UEB3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Puf60Q3UEB3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Puf60Q3UEB3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Puf60Q3UEB3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Puf60Q3UEB3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Puf60Q3UEB3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Puf60Q3UEB3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Puf60Q3UEB3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Puf60Q3UEB3 Gm5812-201ENSMUST00000061073 957 ntBASIC31.76■■■□□ 2.67
Puf60Q3UEB3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Puf60Q3UEB3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC31.76■■■□□ 2.67
Puf60Q3UEB3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Puf60Q3UEB3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Puf60Q3UEB3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Puf60Q3UEB3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.74■■■□□ 2.67
Puf60Q3UEB3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Puf60Q3UEB3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Puf60Q3UEB3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Puf60Q3UEB3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Puf60Q3UEB3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Puf60Q3UEB3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Puf60Q3UEB3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Puf60Q3UEB3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Puf60Q3UEB3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Puf60Q3UEB3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Puf60Q3UEB3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
Puf60Q3UEB3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Puf60Q3UEB3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
Puf60Q3UEB3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Puf60Q3UEB3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Puf60Q3UEB3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
Puf60Q3UEB3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Puf60Q3UEB3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Puf60Q3UEB3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Puf60Q3UEB3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.64■■■□□ 2.66
Puf60Q3UEB3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Puf60Q3UEB3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Puf60Q3UEB3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Puf60Q3UEB3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Puf60Q3UEB3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Puf60Q3UEB3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
Puf60Q3UEB3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms