Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.43■■□□□ 1.02
Chd8Q09XV5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd8Q09XV5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.42■■□□□ 1.02
Chd8Q09XV5 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.42■■□□□ 1.02
Chd8Q09XV5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Chd8Q09XV5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd8Q09XV5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd8Q09XV5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd8Q09XV5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chd8Q09XV5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chd8Q09XV5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chd8Q09XV5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chd8Q09XV5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chd8Q09XV5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chd8Q09XV5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chd8Q09XV5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Chd8Q09XV5 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.38■■□□□ 1.01
Chd8Q09XV5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Chd8Q09XV5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd8Q09XV5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Chd8Q09XV5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd8Q09XV5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.37■■□□□ 1.01
Chd8Q09XV5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd8Q09XV5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chd8Q09XV5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Chd8Q09XV5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd8Q09XV5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.35■■□□□ 1.01
Chd8Q09XV5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
Chd8Q09XV5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Chd8Q09XV5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd8Q09XV5 Gm18284-201ENSMUST00000172604 624 ntBASIC21.34■■□□□ 1.01
Chd8Q09XV5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.34■■□□□ 1.01
Chd8Q09XV5 Gm37136-201ENSMUST00000194368 194 ntBASIC21.34■■□□□ 1.01
Chd8Q09XV5 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.34■■□□□ 1.01
Chd8Q09XV5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd8Q09XV5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd8Q09XV5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.33■■□□□ 1.01
Chd8Q09XV5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd8Q09XV5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.33■■□□□ 1
Chd8Q09XV5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chd8Q09XV5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chd8Q09XV5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd8Q09XV5 Gm12821-201ENSMUST00000120022 600 ntBASIC21.31■■□□□ 1
Chd8Q09XV5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd8Q09XV5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd8Q09XV5 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.31■■□□□ 1
Chd8Q09XV5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd8Q09XV5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Chd8Q09XV5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd8Q09XV5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.29■■□□□ 1
Chd8Q09XV5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.29■■□□□ 1
Chd8Q09XV5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd8Q09XV5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd8Q09XV5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd8Q09XV5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.28■■□□□ 1
Chd8Q09XV5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd8Q09XV5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.28■■□□□ 1
Chd8Q09XV5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.28■■□□□ 1
Chd8Q09XV5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd8Q09XV5 Gm27454-201ENSMUST00000185090 204 ntBASIC21.27■■□□□ 1
Chd8Q09XV5 Gm7417-201ENSMUST00000192950 473 ntBASIC21.27■■□□□ 1
Chd8Q09XV5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd8Q09XV5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd8Q09XV5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chd8Q09XV5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Chd8Q09XV5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd8Q09XV5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd8Q09XV5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd8Q09XV5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chd8Q09XV5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Chd8Q09XV5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.26■□□□□ 0.99
Chd8Q09XV5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd8Q09XV5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chd8Q09XV5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chd8Q09XV5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd8Q09XV5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd8Q09XV5 Gm12922-201ENSMUST00000120626 809 ntBASIC21.24■□□□□ 0.99
Chd8Q09XV5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Chd8Q09XV5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd8Q09XV5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd8Q09XV5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd8Q09XV5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.24■□□□□ 0.99
Chd8Q09XV5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.24■□□□□ 0.99
Chd8Q09XV5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd8Q09XV5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd8Q09XV5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd8Q09XV5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.23■□□□□ 0.99
Chd8Q09XV5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Chd8Q09XV5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd8Q09XV5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd8Q09XV5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chd8Q09XV5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chd8Q09XV5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Chd8Q09XV5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd8Q09XV5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd8Q09XV5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Chd8Q09XV5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd8Q09XV5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd8Q09XV5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.19■□□□□ 0.98
Chd8Q09XV5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms