Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf1P81269 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf1P81269 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf1P81269 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf1P81269 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf1P81269 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf1P81269 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf1P81269 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf1P81269 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf1P81269 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Atf1P81269 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf1P81269 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf1P81269 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Atf1P81269 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf1P81269 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf1P81269 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf1P81269 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf1P81269 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf1P81269 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf1P81269 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf1P81269 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Atf1P81269 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Atf1P81269 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.59■□□□□ 0.73
Atf1P81269 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.59■□□□□ 0.73
Atf1P81269 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.59■□□□□ 0.73
Atf1P81269 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atf1P81269 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf1P81269 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.58■□□□□ 0.72
Atf1P81269 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf1P81269 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf1P81269 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf1P81269 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf1P81269 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf1P81269 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.57■□□□□ 0.72
Atf1P81269 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
Atf1P81269 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atf1P81269 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.57■□□□□ 0.72
Atf1P81269 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf1P81269 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf1P81269 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Atf1P81269 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf1P81269 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf1P81269 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf1P81269 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.55■□□□□ 0.72
Atf1P81269 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf1P81269 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf1P81269 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf1P81269 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf1P81269 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf1P81269 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf1P81269 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf1P81269 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf1P81269 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf1P81269 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf1P81269 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf1P81269 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf1P81269 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf1P81269 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Atf1P81269 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Atf1P81269 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf1P81269 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf1P81269 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf1P81269 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf1P81269 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf1P81269 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf1P81269 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf1P81269 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf1P81269 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Atf1P81269 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf1P81269 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf1P81269 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.49■□□□□ 0.71
Atf1P81269 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atf1P81269 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf1P81269 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf1P81269 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Atf1P81269 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf1P81269 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atf1P81269 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf1P81269 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf1P81269 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Atf1P81269 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf1P81269 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Atf1P81269 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Atf1P81269 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.46■□□□□ 0.71
Atf1P81269 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf1P81269 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf1P81269 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf1P81269 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf1P81269 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.45■□□□□ 0.7
Atf1P81269 Gm4799-201ENSMUST00000095396 657 ntBASIC19.45■□□□□ 0.7
Atf1P81269 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf1P81269 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atf1P81269 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf1P81269 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.44■□□□□ 0.7
Atf1P81269 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf1P81269 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf1P81269 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf1P81269 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf1P81269 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf1P81269 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms