Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otx1P80205 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Otx1P80205 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otx1P80205 Mir3960-201ENSMUST00000198213 73 ntBASIC19.56■□□□□ 0.72
Otx1P80205 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otx1P80205 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Otx1P80205 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otx1P80205 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Otx1P80205 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otx1P80205 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otx1P80205 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Otx1P80205 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.54■□□□□ 0.72
Otx1P80205 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.54■□□□□ 0.72
Otx1P80205 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Otx1P80205 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Otx1P80205 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Otx1P80205 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Otx1P80205 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Otx1P80205 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otx1P80205 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otx1P80205 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.52■□□□□ 0.72
Otx1P80205 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Otx1P80205 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otx1P80205 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Otx1P80205 Gm45364-201ENSMUST00000210883 159 ntBASIC19.51■□□□□ 0.71
Otx1P80205 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.51■□□□□ 0.71
Otx1P80205 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Otx1P80205 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
Otx1P80205 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otx1P80205 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otx1P80205 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.5■□□□□ 0.71
Otx1P80205 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Otx1P80205 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Otx1P80205 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Otx1P80205 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Otx1P80205 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.49■□□□□ 0.71
Otx1P80205 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Otx1P80205 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.49■□□□□ 0.71
Otx1P80205 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otx1P80205 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otx1P80205 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otx1P80205 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otx1P80205 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Otx1P80205 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otx1P80205 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otx1P80205 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otx1P80205 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otx1P80205 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otx1P80205 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.46■□□□□ 0.71
Otx1P80205 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otx1P80205 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otx1P80205 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otx1P80205 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otx1P80205 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Otx1P80205 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Otx1P80205 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otx1P80205 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otx1P80205 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otx1P80205 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otx1P80205 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otx1P80205 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Otx1P80205 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.43■□□□□ 0.7
Otx1P80205 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otx1P80205 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Otx1P80205 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Otx1P80205 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otx1P80205 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.42■□□□□ 0.7
Otx1P80205 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Otx1P80205 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otx1P80205 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.42■□□□□ 0.7
Otx1P80205 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.42■□□□□ 0.7
Otx1P80205 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Otx1P80205 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.42■□□□□ 0.7
Otx1P80205 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otx1P80205 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otx1P80205 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Otx1P80205 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otx1P80205 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.42■□□□□ 0.7
Otx1P80205 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otx1P80205 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otx1P80205 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otx1P80205 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Otx1P80205 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otx1P80205 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Otx1P80205 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otx1P80205 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.4■□□□□ 0.7
Otx1P80205 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Otx1P80205 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otx1P80205 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Otx1P80205 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otx1P80205 Terc-201ENSMUST00000082862 423 ntBASIC19.38■□□□□ 0.69
Otx1P80205 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otx1P80205 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otx1P80205 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otx1P80205 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Otx1P80205 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.37■□□□□ 0.69
Otx1P80205 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Otx1P80205 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otx1P80205 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.37■□□□□ 0.69
Otx1P80205 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms