Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.21■□□□□ 0.99
Six5P70178 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Six5P70178 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.2■□□□□ 0.98
Six5P70178 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.19■□□□□ 0.98
Six5P70178 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Six5P70178 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six5P70178 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six5P70178 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.18■□□□□ 0.98
Six5P70178 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.18■□□□□ 0.98
Six5P70178 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.18■□□□□ 0.98
Six5P70178 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.18■□□□□ 0.98
Six5P70178 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Six5P70178 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six5P70178 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Six5P70178 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.17■□□□□ 0.98
Six5P70178 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six5P70178 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six5P70178 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Six5P70178 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Six5P70178 Gm6311-201ENSMUST00000073790 878 ntBASIC21.14■□□□□ 0.97
Six5P70178 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six5P70178 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six5P70178 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.13■□□□□ 0.97
Six5P70178 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Six5P70178 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Six5P70178 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.12■□□□□ 0.97
Six5P70178 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six5P70178 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six5P70178 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six5P70178 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six5P70178 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.11■□□□□ 0.97
Six5P70178 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six5P70178 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six5P70178 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six5P70178 Terc-201ENSMUST00000082862 423 ntBASIC21.1■□□□□ 0.97
Six5P70178 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six5P70178 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Six5P70178 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six5P70178 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Six5P70178 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six5P70178 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.08■□□□□ 0.97
Six5P70178 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Six5P70178 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six5P70178 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
Six5P70178 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.07■□□□□ 0.96
Six5P70178 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six5P70178 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.07■□□□□ 0.96
Six5P70178 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.05■□□□□ 0.96
Six5P70178 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six5P70178 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Six5P70178 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.03■□□□□ 0.96
Six5P70178 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six5P70178 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six5P70178 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.02■□□□□ 0.96
Six5P70178 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Six5P70178 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Six5P70178 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.02■□□□□ 0.96
Six5P70178 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms