Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm3P62311 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm3P62311 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Lsm3P62311 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm3P62311 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm3P62311 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm3P62311 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm3P62311 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.75■□□□□ 0.91
Lsm3P62311 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Lsm3P62311 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.75■□□□□ 0.91
Lsm3P62311 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm3P62311 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm3P62311 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lsm3P62311 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm3P62311 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm3P62311 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm3P62311 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm3P62311 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm3P62311 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm3P62311 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Lsm3P62311 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm3P62311 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm3P62311 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm3P62311 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm3P62311 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.71■□□□□ 0.91
Lsm3P62311 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Lsm3P62311 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm3P62311 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm3P62311 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm3P62311 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm3P62311 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm3P62311 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.7■□□□□ 0.9
Lsm3P62311 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm3P62311 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Lsm3P62311 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.69■□□□□ 0.9
Lsm3P62311 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm3P62311 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lsm3P62311 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm3P62311 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm3P62311 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.68■□□□□ 0.9
Lsm3P62311 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm3P62311 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.67■□□□□ 0.9
Lsm3P62311 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm3P62311 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.67■□□□□ 0.9
Lsm3P62311 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm3P62311 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lsm3P62311 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm3P62311 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm3P62311 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm3P62311 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Lsm3P62311 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm3P62311 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm3P62311 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm3P62311 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm3P62311 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm3P62311 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.65■□□□□ 0.9
Lsm3P62311 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm3P62311 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm3P62311 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Lsm3P62311 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm3P62311 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lsm3P62311 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm3P62311 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm3P62311 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm3P62311 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm3P62311 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm3P62311 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.63■□□□□ 0.89
Lsm3P62311 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm3P62311 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lsm3P62311 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm3P62311 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Lsm3P62311 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Lsm3P62311 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm3P62311 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm3P62311 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.62■□□□□ 0.89
Lsm3P62311 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm3P62311 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm3P62311 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm3P62311 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm3P62311 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lsm3P62311 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm3P62311 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm3P62311 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm3P62311 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.61■□□□□ 0.89
Lsm3P62311 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm3P62311 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm3P62311 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.6■□□□□ 0.89
Lsm3P62311 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.6■□□□□ 0.89
Lsm3P62311 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm3P62311 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm3P62311 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm3P62311 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm3P62311 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms