Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.81■□□□□ 0.76
Sec61a1P61620 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a1P61620 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a1P61620 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a1P61620 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a1P61620 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a1P61620 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a1P61620 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a1P61620 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.79■□□□□ 0.76
Sec61a1P61620 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Sec61a1P61620 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a1P61620 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.79■□□□□ 0.76
Sec61a1P61620 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a1P61620 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a1P61620 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a1P61620 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sec61a1P61620 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sec61a1P61620 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Sec61a1P61620 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a1P61620 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a1P61620 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sec61a1P61620 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a1P61620 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a1P61620 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.77■□□□□ 0.76
Sec61a1P61620 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sec61a1P61620 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sec61a1P61620 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec61a1P61620 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sec61a1P61620 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec61a1P61620 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a1P61620 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a1P61620 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a1P61620 Gm7432-201ENSMUST00000210343 879 ntBASIC19.75■□□□□ 0.75
Sec61a1P61620 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a1P61620 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Sec61a1P61620 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec61a1P61620 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sec61a1P61620 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sec61a1P61620 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Sec61a1P61620 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sec61a1P61620 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a1P61620 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sec61a1P61620 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a1P61620 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a1P61620 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sec61a1P61620 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sec61a1P61620 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.72■□□□□ 0.75
Sec61a1P61620 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a1P61620 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sec61a1P61620 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a1P61620 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a1P61620 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a1P61620 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a1P61620 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sec61a1P61620 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec61a1P61620 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sec61a1P61620 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sec61a1P61620 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.7■□□□□ 0.74
Sec61a1P61620 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.7■□□□□ 0.74
Sec61a1P61620 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sec61a1P61620 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sec61a1P61620 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sec61a1P61620 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Sec61a1P61620 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a1P61620 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.68■□□□□ 0.74
Sec61a1P61620 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a1P61620 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sec61a1P61620 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a1P61620 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a1P61620 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
Sec61a1P61620 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a1P61620 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a1P61620 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sec61a1P61620 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Gm11599-201ENSMUST00000118720 878 ntBASIC19.66■□□□□ 0.74
Sec61a1P61620 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.66■□□□□ 0.74
Sec61a1P61620 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sec61a1P61620 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sec61a1P61620 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sec61a1P61620 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.65■□□□□ 0.74
Sec61a1P61620 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.65■□□□□ 0.74
Sec61a1P61620 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a1P61620 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.65■□□□□ 0.74
Sec61a1P61620 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a1P61620 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a1P61620 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sec61a1P61620 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms