Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SNU13P55769 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SNU13P55769 AL449106.1-201ENST00000608517 1980 ntBASIC21.32■■□□□ 1
SNU13P55769 DUX4L29-201ENST00000425409 679 ntBASIC21.32■■□□□ 1
SNU13P55769 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNU13P55769 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNU13P55769 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNU13P55769 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SNU13P55769 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNU13P55769 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SNU13P55769 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNU13P55769 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.29■■□□□ 1
SNU13P55769 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNU13P55769 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNU13P55769 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNU13P55769 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNU13P55769 AC018358.1-201ENST00000631079 1402 ntBASIC21.29■■□□□ 1
SNU13P55769 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNU13P55769 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.28■■□□□ 1
SNU13P55769 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.28■■□□□ 1
SNU13P55769 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNU13P55769 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNU13P55769 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SNU13P55769 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNU13P55769 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNU13P55769 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SNU13P55769 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SNU13P55769 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNU13P55769 AC110285.7-201ENST00000624417 1536 ntBASIC21.26■□□□□ 0.99
SNU13P55769 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNU13P55769 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNU13P55769 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNU13P55769 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SNU13P55769 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SNU13P55769 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNU13P55769 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.25■□□□□ 0.99
SNU13P55769 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.25■□□□□ 0.99
SNU13P55769 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.25■□□□□ 0.99
SNU13P55769 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.25■□□□□ 0.99
SNU13P55769 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNU13P55769 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNU13P55769 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNU13P55769 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.25■□□□□ 0.99
SNU13P55769 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.24■□□□□ 0.99
SNU13P55769 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SNU13P55769 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNU13P55769 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.24■□□□□ 0.99
SNU13P55769 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SNU13P55769 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNU13P55769 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SNU13P55769 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SNU13P55769 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.23■□□□□ 0.99
SNU13P55769 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNU13P55769 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SNU13P55769 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNU13P55769 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.23■□□□□ 0.99
SNU13P55769 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNU13P55769 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNU13P55769 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.21■□□□□ 0.99
SNU13P55769 AC091060.1-201ENST00000623524 1766 ntBASIC21.2■□□□□ 0.99
SNU13P55769 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.2■□□□□ 0.98
SNU13P55769 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNU13P55769 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNU13P55769 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNU13P55769 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SNU13P55769 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
SNU13P55769 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
SNU13P55769 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SNU13P55769 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNU13P55769 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.18■□□□□ 0.98
SNU13P55769 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNU13P55769 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.17■□□□□ 0.98
SNU13P55769 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNU13P55769 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNU13P55769 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNU13P55769 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNU13P55769 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.17■□□□□ 0.98
SNU13P55769 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SNU13P55769 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.16■□□□□ 0.98
SNU13P55769 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.16■□□□□ 0.98
SNU13P55769 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNU13P55769 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNU13P55769 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNU13P55769 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SNU13P55769 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SNU13P55769 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SNU13P55769 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.15■□□□□ 0.98
SNU13P55769 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.14■□□□□ 0.98
SNU13P55769 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
SNU13P55769 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNU13P55769 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNU13P55769 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNU13P55769 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNU13P55769 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms