Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm7432-201ENSMUST00000210343 879 ntBASIC20.34■□□□□ 0.85
Abcd3P55096 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcd3P55096 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Abcd3P55096 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Abcd3P55096 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Abcd3P55096 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Abcd3P55096 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Abcd3P55096 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Abcd3P55096 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcd3P55096 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Abcd3P55096 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.31■□□□□ 0.84
Abcd3P55096 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcd3P55096 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Abcd3P55096 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcd3P55096 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcd3P55096 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Abcd3P55096 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Abcd3P55096 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.3■□□□□ 0.84
Abcd3P55096 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcd3P55096 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Abcd3P55096 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Abcd3P55096 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Abcd3P55096 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Abcd3P55096 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcd3P55096 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcd3P55096 Gm11599-201ENSMUST00000118720 878 ntBASIC20.28■□□□□ 0.84
Abcd3P55096 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.28■□□□□ 0.84
Abcd3P55096 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcd3P55096 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Abcd3P55096 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcd3P55096 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcd3P55096 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcd3P55096 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcd3P55096 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Abcd3P55096 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcd3P55096 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcd3P55096 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.27■□□□□ 0.84
Abcd3P55096 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.27■□□□□ 0.84
Abcd3P55096 Gm4799-201ENSMUST00000095396 657 ntBASIC20.27■□□□□ 0.84
Abcd3P55096 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcd3P55096 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.27■□□□□ 0.84
Abcd3P55096 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcd3P55096 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.26■□□□□ 0.83
Abcd3P55096 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.26■□□□□ 0.83
Abcd3P55096 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.26■□□□□ 0.83
Abcd3P55096 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Abcd3P55096 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcd3P55096 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcd3P55096 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcd3P55096 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcd3P55096 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcd3P55096 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Abcd3P55096 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.24■□□□□ 0.83
Abcd3P55096 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Abcd3P55096 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Abcd3P55096 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abcd3P55096 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Abcd3P55096 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcd3P55096 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcd3P55096 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcd3P55096 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.21■□□□□ 0.83
Abcd3P55096 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Abcd3P55096 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Abcd3P55096 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Abcd3P55096 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Abcd3P55096 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Abcd3P55096 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Abcd3P55096 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Abcd3P55096 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd3P55096 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd3P55096 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd3P55096 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Abcd3P55096 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd3P55096 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd3P55096 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd3P55096 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Abcd3P55096 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Abcd3P55096 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Abcd3P55096 Mir3960-201ENSMUST00000198213 73 ntBASIC20.18■□□□□ 0.82
Abcd3P55096 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.18■□□□□ 0.82
Abcd3P55096 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcd3P55096 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Abcd3P55096 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcd3P55096 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcd3P55096 Gm9812-201ENSMUST00000061934 968 ntBASIC20.17■□□□□ 0.82
Abcd3P55096 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcd3P55096 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd3P55096 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd3P55096 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Abcd3P55096 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.15■□□□□ 0.82
Abcd3P55096 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd3P55096 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.15■□□□□ 0.82
Abcd3P55096 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd3P55096 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Abcd3P55096 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Abcd3P55096 Gm45364-201ENSMUST00000210883 159 ntBASIC20.14■□□□□ 0.81
Abcd3P55096 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.13■□□□□ 0.81
Abcd3P55096 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.13■□□□□ 0.81
Abcd3P55096 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcd3P55096 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms