Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC4P55056 AL359258.2-201ENST00000564063 1566 ntBASIC18.31■□□□□ 0.52
APOC4P55056 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
APOC4P55056 AC092296.2-201ENST00000589470 999 ntBASIC18.31■□□□□ 0.52
APOC4P55056 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC4P55056 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC4P55056 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC4P55056 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
APOC4P55056 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOC4P55056 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.29■□□□□ 0.52
APOC4P55056 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APOC4P55056 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOC4P55056 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOC4P55056 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.29■□□□□ 0.52
APOC4P55056 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOC4P55056 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOC4P55056 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.28■□□□□ 0.52
APOC4P55056 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOC4P55056 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.28■□□□□ 0.52
APOC4P55056 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APOC4P55056 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APOC4P55056 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.27■□□□□ 0.52
APOC4P55056 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOC4P55056 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APOC4P55056 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOC4P55056 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOC4P55056 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.25■□□□□ 0.51
APOC4P55056 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
APOC4P55056 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOC4P55056 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOC4P55056 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
APOC4P55056 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.24■□□□□ 0.51
APOC4P55056 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOC4P55056 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOC4P55056 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOC4P55056 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APOC4P55056 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APOC4P55056 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.23■□□□□ 0.51
APOC4P55056 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APOC4P55056 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.23■□□□□ 0.51
APOC4P55056 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APOC4P55056 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOC4P55056 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOC4P55056 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.23■□□□□ 0.51
APOC4P55056 NTF6A-201ENST00000591175 560 ntBASIC18.23■□□□□ 0.51
APOC4P55056 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.23■□□□□ 0.51
APOC4P55056 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APOC4P55056 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOC4P55056 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOC4P55056 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOC4P55056 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APOC4P55056 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
APOC4P55056 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.22■□□□□ 0.51
APOC4P55056 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.22■□□□□ 0.51
APOC4P55056 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.22■□□□□ 0.51
APOC4P55056 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
APOC4P55056 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
APOC4P55056 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.21■□□□□ 0.51
APOC4P55056 AL157400.5-201ENST00000507624 621 ntBASIC18.21■□□□□ 0.51
APOC4P55056 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.21■□□□□ 0.51
APOC4P55056 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.21■□□□□ 0.51
APOC4P55056 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
APOC4P55056 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.21■□□□□ 0.51
APOC4P55056 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
APOC4P55056 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APOC4P55056 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
APOC4P55056 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APOC4P55056 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.2■□□□□ 0.5
APOC4P55056 SMPD5-203ENST00000639008 1464 ntBASIC18.2■□□□□ 0.5
APOC4P55056 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APOC4P55056 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.19■□□□□ 0.5
APOC4P55056 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.19■□□□□ 0.5
APOC4P55056 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
APOC4P55056 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.19■□□□□ 0.5
APOC4P55056 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOC4P55056 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APOC4P55056 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APOC4P55056 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.18■□□□□ 0.5
APOC4P55056 AC007029.1-201ENST00000604183 313 ntBASIC18.18■□□□□ 0.5
APOC4P55056 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOC4P55056 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOC4P55056 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOC4P55056 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOC4P55056 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOC4P55056 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
APOC4P55056 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOC4P55056 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOC4P55056 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOC4P55056 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.16■□□□□ 0.5
APOC4P55056 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.15■□□□□ 0.5
APOC4P55056 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOC4P55056 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOC4P55056 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APOC4P55056 AC012354.3-201ENST00000623734 483 ntBASIC18.15■□□□□ 0.5
APOC4P55056 WHAMMP3-201ENST00000611636 1609 ntBASIC18.15■□□□□ 0.5
APOC4P55056 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOC4P55056 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOC4P55056 DRD5P2-201ENST00000421395 2012 ntBASIC18.15■□□□□ 0.5
APOC4P55056 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.14■□□□□ 0.49
APOC4P55056 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms