Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE1AP54750 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE1AP54750 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDE1AP54750 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PDE1AP54750 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.65■■■□□ 2.5
PDE1AP54750 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.64■■■□□ 2.5
PDE1AP54750 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDE1AP54750 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PDE1AP54750 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PDE1AP54750 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDE1AP54750 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.63■■■□□ 2.49
PDE1AP54750 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.63■■■□□ 2.49
PDE1AP54750 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
PDE1AP54750 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
PDE1AP54750 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.62■■■□□ 2.49
PDE1AP54750 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PDE1AP54750 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
PDE1AP54750 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.61■■■□□ 2.49
PDE1AP54750 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDE1AP54750 MIR3648-2-201ENST00000581792 180 ntBASIC30.61■■■□□ 2.49
PDE1AP54750 MIR3648-1-201ENST00000615959 180 ntBASIC30.61■■■□□ 2.49
PDE1AP54750 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDE1AP54750 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PDE1AP54750 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PDE1AP54750 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PDE1AP54750 AC008813.1-201ENST00000536597 885 ntBASIC30.6■■■□□ 2.49
PDE1AP54750 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE1AP54750 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.59■■■□□ 2.49
PDE1AP54750 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
PDE1AP54750 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
PDE1AP54750 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE1AP54750 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.59■■■□□ 2.49
PDE1AP54750 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.59■■■□□ 2.49
PDE1AP54750 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE1AP54750 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE1AP54750 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PDE1AP54750 AL449106.1-201ENST00000608517 1980 ntBASIC30.58■■■□□ 2.49
PDE1AP54750 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE1AP54750 HLA-V-202ENST00000446817 847 ntBASIC30.58■■■□□ 2.49
PDE1AP54750 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PDE1AP54750 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.57■■■□□ 2.48
PDE1AP54750 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDE1AP54750 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
PDE1AP54750 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
PDE1AP54750 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
PDE1AP54750 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
PDE1AP54750 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.55■■■□□ 2.48
PDE1AP54750 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.55■■■□□ 2.48
PDE1AP54750 MIR7108-201ENST00000614319 87 ntBASIC30.55■■■□□ 2.48
PDE1AP54750 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
PDE1AP54750 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE1AP54750 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.54■■■□□ 2.48
PDE1AP54750 AC148477.6-201ENST00000623746 465 ntBASIC30.54■■■□□ 2.48
PDE1AP54750 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PDE1AP54750 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE1AP54750 MIR219A2-201ENST00000608502 1504 ntBASIC30.52■■■□□ 2.48
PDE1AP54750 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.52■■■□□ 2.48
PDE1AP54750 AC016575.1-201ENST00000607026 382 ntBASIC30.52■■■□□ 2.48
PDE1AP54750 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
PDE1AP54750 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PDE1AP54750 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
PDE1AP54750 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.51■■■□□ 2.47
PDE1AP54750 WHAMMP3-201ENST00000611636 1609 ntBASIC30.51■■■□□ 2.47
PDE1AP54750 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDE1AP54750 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.5■■■□□ 2.47
PDE1AP54750 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDE1AP54750 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.5■■■□□ 2.47
PDE1AP54750 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.49■■■□□ 2.47
PDE1AP54750 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PDE1AP54750 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
PDE1AP54750 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PDE1AP54750 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PDE1AP54750 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PDE1AP54750 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
PDE1AP54750 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PDE1AP54750 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.47■■■□□ 2.47
PDE1AP54750 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.47■■■□□ 2.47
PDE1AP54750 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.47■■■□□ 2.47
PDE1AP54750 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PDE1AP54750 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
PDE1AP54750 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PDE1AP54750 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PDE1AP54750 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
PDE1AP54750 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
PDE1AP54750 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.44■■■□□ 2.46
PDE1AP54750 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.44■■■□□ 2.46
PDE1AP54750 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDE1AP54750 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.43■■■□□ 2.46
PDE1AP54750 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.43■■■□□ 2.46
PDE1AP54750 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDE1AP54750 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDE1AP54750 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
PDE1AP54750 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDE1AP54750 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.42■■■□□ 2.46
PDE1AP54750 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PDE1AP54750 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.41■■■□□ 2.46
PDE1AP54750 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.41■■■□□ 2.46
PDE1AP54750 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PDE1AP54750 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PDE1AP54750 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 1085.7 ms