Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Pdx1P52946 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pdx1P52946 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pdx1P52946 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pdx1P52946 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pdx1P52946 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pdx1P52946 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.51■■□□□ 1.19
Pdx1P52946 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.51■■□□□ 1.19
Pdx1P52946 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pdx1P52946 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pdx1P52946 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pdx1P52946 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pdx1P52946 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.49■■□□□ 1.19
Pdx1P52946 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pdx1P52946 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.48■■□□□ 1.19
Pdx1P52946 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pdx1P52946 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pdx1P52946 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pdx1P52946 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.47■■□□□ 1.19
Pdx1P52946 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pdx1P52946 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pdx1P52946 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Pdx1P52946 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pdx1P52946 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pdx1P52946 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Pdx1P52946 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pdx1P52946 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pdx1P52946 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pdx1P52946 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pdx1P52946 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pdx1P52946 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pdx1P52946 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pdx1P52946 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdx1P52946 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdx1P52946 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdx1P52946 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdx1P52946 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
Pdx1P52946 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdx1P52946 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pdx1P52946 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.42■■□□□ 1.18
Pdx1P52946 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pdx1P52946 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pdx1P52946 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pdx1P52946 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pdx1P52946 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.41■■□□□ 1.18
Pdx1P52946 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Pdx1P52946 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pdx1P52946 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pdx1P52946 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pdx1P52946 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pdx1P52946 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pdx1P52946 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.37■■□□□ 1.17
Pdx1P52946 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdx1P52946 Terc-201ENSMUST00000082862 423 ntBASIC22.37■■□□□ 1.17
Pdx1P52946 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pdx1P52946 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pdx1P52946 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.36■■□□□ 1.17
Pdx1P52946 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdx1P52946 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pdx1P52946 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.36■■□□□ 1.17
Pdx1P52946 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdx1P52946 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pdx1P52946 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdx1P52946 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdx1P52946 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdx1P52946 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pdx1P52946 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdx1P52946 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
Pdx1P52946 Scarna2-201ENSMUST00000157560 414 ntBASIC22.35■■□□□ 1.17
Pdx1P52946 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdx1P52946 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdx1P52946 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.35■■□□□ 1.17
Pdx1P52946 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pdx1P52946 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.34■■□□□ 1.17
Pdx1P52946 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pdx1P52946 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdx1P52946 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdx1P52946 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.33■■□□□ 1.17
Pdx1P52946 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pdx1P52946 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pdx1P52946 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Pdx1P52946 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pdx1P52946 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pdx1P52946 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Pdx1P52946 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pdx1P52946 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pdx1P52946 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pdx1P52946 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdx1P52946 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pdx1P52946 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdx1P52946 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdx1P52946 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdx1P52946 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pdx1P52946 Gm11175-201ENSMUST00000116172 543 ntBASIC22.31■■□□□ 1.16
Pdx1P52946 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdx1P52946 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdx1P52946 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdx1P52946 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdx1P52946 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdx1P52946 Gm16437-201ENSMUST00000025669 507 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms