Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Xcl1P47993 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Xcl1P47993 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Xcl1P47993 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Xcl1P47993 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Xcl1P47993 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Xcl1P47993 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Xcl1P47993 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Xcl1P47993 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Xcl1P47993 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Xcl1P47993 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Xcl1P47993 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.97□□□□□ -0.01
Xcl1P47993 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Xcl1P47993 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Xcl1P47993 Gm30346-201ENSMUST00000218641 1699 ntBASIC14.97□□□□□ -0.01
Xcl1P47993 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Xcl1P47993 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Xcl1P47993 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Xcl1P47993 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Xcl1P47993 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Xcl1P47993 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Xcl1P47993 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Xcl1P47993 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Xcl1P47993 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Xcl1P47993 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Xcl1P47993 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Xcl1P47993 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Xcl1P47993 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Xcl1P47993 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Xcl1P47993 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Xcl1P47993 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Xcl1P47993 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Xcl1P47993 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Xcl1P47993 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Xcl1P47993 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.92□□□□□ -0.02
Xcl1P47993 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Xcl1P47993 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Xcl1P47993 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Xcl1P47993 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Xcl1P47993 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Xcl1P47993 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Xcl1P47993 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Xcl1P47993 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Xcl1P47993 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Xcl1P47993 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Xcl1P47993 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Xcl1P47993 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Xcl1P47993 Notumos-201ENSMUST00000151998 2659 ntBASIC14.9□□□□□ -0.02
Xcl1P47993 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.9□□□□□ -0.02
Xcl1P47993 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Xcl1P47993 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Xcl1P47993 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Xcl1P47993 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Xcl1P47993 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Xcl1P47993 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Xcl1P47993 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Xcl1P47993 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Xcl1P47993 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Xcl1P47993 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Xcl1P47993 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Xcl1P47993 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Xcl1P47993 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Xcl1P47993 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Xcl1P47993 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Xcl1P47993 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.87□□□□□ -0.03
Xcl1P47993 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
Xcl1P47993 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Xcl1P47993 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Xcl1P47993 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Xcl1P47993 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Xcl1P47993 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Xcl1P47993 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Xcl1P47993 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Xcl1P47993 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Xcl1P47993 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Xcl1P47993 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms