Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 GET2YER083C 858 nt5.71□□□□□ -1.5
RPB11P38902 BDS1YOL164W 1941 nt5.71□□□□□ -1.5
RPB11P38902 COX16YJL003W 357 nt5.7□□□□□ -1.5
RPB11P38902 INP54YOL065C 1155 nt5.7□□□□□ -1.5
RPB11P38902 PHO3YBR092C 1404 nt5.7□□□□□ -1.5
RPB11P38902 YNL295WYNL295W 1575 nt5.7□□□□□ -1.5
RPB11P38902 NOG2YNR053C 1461 nt5.7□□□□□ -1.5
RPB11P38902 PET18YCR020C 648 nt5.69□□□□□ -1.5
RPB11P38902 PAU15YIR041W 375 nt5.69□□□□□ -1.5
RPB11P38902 CDC7YDL017W 1524 nt5.69□□□□□ -1.5
RPB11P38902 YHR131CYHR131C 2553 nt5.68□□□□□ -1.5
RPB11P38902 YML034C-AYML034C-A 399 nt5.68□□□□□ -1.5
RPB11P38902 YNR014WYNR014W 639 nt5.68□□□□□ -1.5
RPB11P38902 TKL2YBR117C 2046 nt5.68□□□□□ -1.5
RPB11P38902 MLS1YNL117W 1665 nt5.68□□□□□ -1.5
RPB11P38902 MRPL28YDR462W 444 nt5.67□□□□□ -1.5
RPB11P38902 MIX17YMR002W 471 nt5.67□□□□□ -1.5
RPB11P38902 CEM1YER061C 1329 nt5.67□□□□□ -1.5
RPB11P38902 FCY22YER060W-A 1593 nt5.67□□□□□ -1.5
RPB11P38902 RRP43YCR035C 1185 nt5.66□□□□□ -1.5
RPB11P38902 YNL200CYNL200C 741 nt5.66□□□□□ -1.5
RPB11P38902 RDR1YOR380W 1641 nt5.66□□□□□ -1.5
RPB11P38902 SKI2YLR398C 3864 nt5.66□□□□□ -1.5
RPB11P38902 tS(GCU)LtS(GCU)L 80 nt5.65□□□□□ -1.5
RPB11P38902 RDN5-2RDN5-2 119 nt5.65□□□□□ -1.5
RPB11P38902 RDN5-3RDN5-3 119 nt5.65□□□□□ -1.5
RPB11P38902 RDN5-4RDN5-4 119 nt5.65□□□□□ -1.5
RPB11P38902 RDN5-5RDN5-5 119 nt5.65□□□□□ -1.5
RPB11P38902 FCY1YPR062W 477 nt5.65□□□□□ -1.5
RPB11P38902 DAL4YIR028W 1908 nt5.65□□□□□ -1.51
RPB11P38902 PPH22YDL188C 1134 nt5.64□□□□□ -1.51
RPB11P38902 SUF3tG(CCC)D 72 nt5.64□□□□□ -1.51
RPB11P38902 YMR074CYMR074C 438 nt5.64□□□□□ -1.51
RPB11P38902 KNS1YLL019C 2214 nt5.64□□□□□ -1.51
RPB11P38902 VMA2YBR127C 1554 nt5.63□□□□□ -1.51
RPB11P38902 DLD1YDL174C 1764 nt5.63□□□□□ -1.51
RPB11P38902 YJL160CYJL160C 864 nt5.63□□□□□ -1.51
RPB11P38902 IRC5YFR038W 2562 nt5.63□□□□□ -1.51
RPB11P38902 ISC1YER019W 1434 nt5.63□□□□□ -1.51
RPB11P38902 RAD51YER095W 1203 nt5.62□□□□□ -1.51
RPB11P38902 RPL43AYPR043W 279 nt5.62□□□□□ -1.51
RPB11P38902 YPT10YBR264C 600 nt5.62□□□□□ -1.51
RPB11P38902 SPS1YDR523C 1473 nt5.61□□□□□ -1.51
RPB11P38902 YUR1YJL139C 1287 nt5.61□□□□□ -1.51
RPB11P38902 CEF1YMR213W 1773 nt5.6□□□□□ -1.51
RPB11P38902 PGI1YBR196C 1665 nt5.6□□□□□ -1.51
RPB11P38902 GPA1YHR005C 1419 nt5.6□□□□□ -1.51
RPB11P38902 YIL168WYIL168W 384 nt5.6□□□□□ -1.51
RPB11P38902 YJL144WYJL144W 315 nt5.6□□□□□ -1.51
RPB11P38902 MFT1YML062C 1179 nt5.6□□□□□ -1.51
RPB11P38902 DSC3YOR223W 879 nt5.6□□□□□ -1.51
RPB11P38902 RPL5YPL131W 894 nt5.6□□□□□ -1.51
RPB11P38902 VBA5YKR105C 1749 nt5.6□□□□□ -1.51
RPB11P38902 RGT2YDL138W 2292 nt5.59□□□□□ -1.51
RPB11P38902 MSG5YNL053W 1470 nt5.59□□□□□ -1.51
RPB11P38902 PSA1YDL055C 1086 nt5.59□□□□□ -1.51
RPB11P38902 SWM1YDR260C 513 nt5.59□□□□□ -1.51
RPB11P38902 YOL099CYOL099C 492 nt5.59□□□□□ -1.51
RPB11P38902 AVT4YNL101W 2142 nt5.59□□□□□ -1.52
RPB11P38902 THR1YHR025W 1074 nt5.58□□□□□ -1.52
RPB11P38902 CUE4YML101C 354 nt5.58□□□□□ -1.52
RPB11P38902 SPR1YOR190W 1338 nt5.57□□□□□ -1.52
RPB11P38902 HXT2YMR011W 1626 nt5.57□□□□□ -1.52
RPB11P38902 SLA2YNL243W 2907 nt5.57□□□□□ -1.52
RPB11P38902 HAL5YJL165C 2568 nt5.57□□□□□ -1.52
RPB11P38902 DPH5YLR172C 903 nt5.57□□□□□ -1.52
RPB11P38902 YPL247CYPL247C 1572 nt5.56□□□□□ -1.52
RPB11P38902 QCR6YFR033C 444 nt5.56□□□□□ -1.52
RPB11P38902 RIO1YOR119C 1455 nt5.56□□□□□ -1.52
RPB11P38902 PAC2YER007W 1557 nt5.55□□□□□ -1.52
RPB11P38902 UBP13YBL067C 2244 nt5.55□□□□□ -1.52
RPB11P38902 TUF1YOR187W 1314 nt5.55□□□□□ -1.52
RPB11P38902 YLL058WYLL058W 1728 nt5.55□□□□□ -1.52
RPB11P38902 GCN3YKR026C 918 nt5.55□□□□□ -1.52
RPB11P38902 ERG27YLR100W 1044 nt5.55□□□□□ -1.52
RPB11P38902 AIM33YML087C 939 nt5.55□□□□□ -1.52
RPB11P38902 YIL055CYIL055C 1884 nt5.55□□□□□ -1.52
RPB11P38902 TDH1YJL052W 999 nt5.54□□□□□ -1.52
RPB11P38902 PSP2YML017W 1782 nt5.53□□□□□ -1.52
RPB11P38902 UTR5YEL035C 501 nt5.53□□□□□ -1.52
RPB11P38902 HIS1YER055C 894 nt5.53□□□□□ -1.52
RPB11P38902 HGH1YGR187C 1185 nt5.53□□□□□ -1.52
RPB11P38902 YJL064WYJL064W 396 nt5.53□□□□□ -1.52
RPB11P38902 YJL213WYJL213W 996 nt5.53□□□□□ -1.52
RPB11P38902 MGM101YJR144W 810 nt5.53□□□□□ -1.52
RPB11P38902 CPT1YNL130C 1182 nt5.53□□□□□ -1.52
RPB11P38902 ERV2YPR037C 591 nt5.53□□□□□ -1.52
RPB11P38902 PEX31YGR004W 1389 nt5.53□□□□□ -1.52
RPB11P38902 RGD2YFL047W 2145 nt5.53□□□□□ -1.52
RPB11P38902 PNS1YOR161C 1620 nt5.52□□□□□ -1.53
RPB11P38902 SKP1YDR328C 585 nt5.52□□□□□ -1.53
RPB11P38902 STS1YIR011C 960 nt5.52□□□□□ -1.53
RPB11P38902 YKR032WYKR032W 315 nt5.52□□□□□ -1.53
RPB11P38902 PAU19YMR325W 375 nt5.52□□□□□ -1.53
RPB11P38902 TOS1YBR162C 1368 nt5.52□□□□□ -1.53
RPB11P38902 PET117YER058W 324 nt5.51□□□□□ -1.53
RPB11P38902 CCW12YLR110C 402 nt5.51□□□□□ -1.53
RPB11P38902 ADH5YBR145W 1056 nt5.51□□□□□ -1.53
RPB11P38902 AIM3YBR108W 2844 nt5.5□□□□□ -1.53
RPB11P38902 SUF5tG(CCC)O 72 nt5.5□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 94.6 ms