Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Rom1P32958 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rom1P32958 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rom1P32958 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rom1P32958 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18■□□□□ 0.47
Rom1P32958 AC157572.2-201ENSMUST00000226970 908 ntBASIC18■□□□□ 0.47
Rom1P32958 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rom1P32958 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Rom1P32958 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.98■□□□□ 0.47
Rom1P32958 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Rom1P32958 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.98■□□□□ 0.47
Rom1P32958 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.98■□□□□ 0.47
Rom1P32958 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.96■□□□□ 0.47
Rom1P32958 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Rom1P32958 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rom1P32958 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.95■□□□□ 0.46
Rom1P32958 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rom1P32958 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rom1P32958 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rom1P32958 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rom1P32958 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.93■□□□□ 0.46
Rom1P32958 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Rom1P32958 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rom1P32958 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Gm30023-201ENSMUST00000197970 889 ntBASIC17.92■□□□□ 0.46
Rom1P32958 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rom1P32958 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rom1P32958 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.91■□□□□ 0.46
Rom1P32958 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rom1P32958 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Rom1P32958 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rom1P32958 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rom1P32958 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rom1P32958 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.89■□□□□ 0.45
Rom1P32958 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rom1P32958 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rom1P32958 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rom1P32958 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.87■□□□□ 0.45
Rom1P32958 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rom1P32958 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rom1P32958 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms