Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 FTH1YBR207W 1398 nt5.67□□□□□ -1.5
RPB9P27999 AVL9YLR114C 2295 nt5.67□□□□□ -1.5
RPB9P27999 FMP40YPL222W 2067 nt5.67□□□□□ -1.5
RPB9P27999 AFG2YLR397C 2343 nt5.67□□□□□ -1.5
RPB9P27999 FYV1YDR024W 486 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)BtD(GUC)B 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)DtD(GUC)D 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)G1tD(GUC)G1 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)G2tD(GUC)G2 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)I1tD(GUC)I1 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)I2tD(GUC)I2 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)J1tD(GUC)J1 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)J2tD(GUC)J2 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)J3tD(GUC)J3 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)J4tD(GUC)J4 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)KtD(GUC)K 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)L1tD(GUC)L1 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)L2tD(GUC)L2 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)MtD(GUC)M 72 nt5.67□□□□□ -1.5
RPB9P27999 tD(GUC)OtD(GUC)O 72 nt5.67□□□□□ -1.5
RPB9P27999 MLS1YNL117W 1665 nt5.66□□□□□ -1.5
RPB9P27999 MDH1YKL085W 1005 nt5.66□□□□□ -1.5
RPB9P27999 QRI5YLR204W 336 nt5.66□□□□□ -1.5
RPB9P27999 YNR005CYNR005C 405 nt5.66□□□□□ -1.5
RPB9P27999 YAH1YPL252C 519 nt5.66□□□□□ -1.5
RPB9P27999 HBS1YKR084C 1836 nt5.66□□□□□ -1.5
RPB9P27999 TPO1YLL028W 1761 nt5.65□□□□□ -1.5
RPB9P27999 LCL3YGL085W 825 nt5.65□□□□□ -1.5
RPB9P27999 IMD1YAR073W 1212 nt5.65□□□□□ -1.5
RPB9P27999 AVO2YMR068W 1281 nt5.65□□□□□ -1.5
RPB9P27999 MRPS18YNL306W 654 nt5.65□□□□□ -1.5
RPB9P27999 RTC2YBR147W 891 nt5.65□□□□□ -1.5
RPB9P27999 MSB3YNL293W 1902 nt5.65□□□□□ -1.51
RPB9P27999 ECM27YJR106W 2178 nt5.65□□□□□ -1.51
RPB9P27999 SUF3tG(CCC)D 72 nt5.64□□□□□ -1.51
RPB9P27999 ASF1YJL115W 840 nt5.63□□□□□ -1.51
RPB9P27999 MGM101YJR144W 810 nt5.63□□□□□ -1.51
RPB9P27999 AIM34YMR003W 597 nt5.63□□□□□ -1.51
RPB9P27999 TAF9YMR236W 474 nt5.63□□□□□ -1.51
RPB9P27999 MRPL19YNL185C 477 nt5.63□□□□□ -1.51
RPB9P27999 RCF2YNR018W 675 nt5.63□□□□□ -1.51
RPB9P27999 TOP3YLR234W 1971 nt5.63□□□□□ -1.51
RPB9P27999 DIA4YHR011W 1341 nt5.63□□□□□ -1.51
RPB9P27999 BRN1YBL097W 2265 nt5.63□□□□□ -1.51
RPB9P27999 HXT13YEL069C 1695 nt5.63□□□□□ -1.51
RPB9P27999 DRE2YKR071C 1047 nt5.62□□□□□ -1.51
RPB9P27999 VPS65YLR322W 315 nt5.62□□□□□ -1.51
RPB9P27999 ILV6YCL009C 930 nt5.62□□□□□ -1.51
RPB9P27999 RBS1YDL189W 1374 nt5.62□□□□□ -1.51
RPB9P27999 YDR387CYDR387C 1668 nt5.62□□□□□ -1.51
RPB9P27999 ADE16YLR028C 1776 nt5.62□□□□□ -1.51
RPB9P27999 FMO1YHR176W 1299 nt5.61□□□□□ -1.51
RPB9P27999 YNL040WYNL040W 1371 nt5.61□□□□□ -1.51
RPB9P27999 SAL1YNL083W 1485 nt5.61□□□□□ -1.51
RPB9P27999 LEO1YOR123C 1395 nt5.61□□□□□ -1.51
RPB9P27999 HEL1YKR017C 1656 nt5.6□□□□□ -1.51
RPB9P27999 CRH1YGR189C 1524 nt5.6□□□□□ -1.51
RPB9P27999 YDR327WYDR327W 327 nt5.6□□□□□ -1.51
RPB9P27999 RPL2BYIL018W 765 nt5.6□□□□□ -1.51
RPB9P27999 RPL43AYPR043W 279 nt5.6□□□□□ -1.51
RPB9P27999 PMT1YDL095W 2454 nt5.6□□□□□ -1.51
RPB9P27999 GCG1YER163C 699 nt5.59□□□□□ -1.51
RPB9P27999 YOL099CYOL099C 492 nt5.59□□□□□ -1.51
RPB9P27999 SMC5YOL034W 3282 nt5.58□□□□□ -1.52
RPB9P27999 AFG3YER017C 2286 nt5.58□□□□□ -1.52
RPB9P27999 YCR061WYCR061W 1896 nt5.58□□□□□ -1.52
RPB9P27999 CHA1YCL064C 1083 nt5.57□□□□□ -1.52
RPB9P27999 TFG2YGR005C 1203 nt5.57□□□□□ -1.52
RPB9P27999 YHR218W-AYHR218W-A 318 nt5.57□□□□□ -1.52
RPB9P27999 NTG2YOL043C 1143 nt5.57□□□□□ -1.52
RPB9P27999 YBL112CYBL112C 318 nt5.57□□□□□ -1.52
RPB9P27999 NUP49YGL172W 1419 nt5.57□□□□□ -1.52
RPB9P27999 DMC1YER179W 1005 nt5.56□□□□□ -1.52
RPB9P27999 ATP10YLR393W 840 nt5.56□□□□□ -1.52
RPB9P27999 ITR1YDR497C 1755 nt5.56□□□□□ -1.52
RPB9P27999 RSC9YML127W 1746 nt5.56□□□□□ -1.52
RPB9P27999 YLL056CYLL056C 897 nt5.55□□□□□ -1.52
RPB9P27999 ATO2YNR002C 849 nt5.55□□□□□ -1.52
RPB9P27999 LSC1YOR142W 990 nt5.55□□□□□ -1.52
RPB9P27999 PFS2YNL317W 1398 nt5.55□□□□□ -1.52
RPB9P27999 TPI1YDR050C 747 nt5.54□□□□□ -1.52
RPB9P27999 YIP4YGL198W 708 nt5.54□□□□□ -1.52
RPB9P27999 YMR252CYMR252C 405 nt5.54□□□□□ -1.52
RPB9P27999 YPL041CYPL041C 624 nt5.54□□□□□ -1.52
RPB9P27999 PDC5YLR134W 1692 nt5.53□□□□□ -1.52
RPB9P27999 OM45YIL136W 1182 nt5.53□□□□□ -1.52
RPB9P27999 snR4snR4 186 nt5.53□□□□□ -1.52
RPB9P27999 RUP1YOR138C 2016 nt5.53□□□□□ -1.52
RPB9P27999 YBR113WYBR113W 483 nt5.52□□□□□ -1.53
RPB9P27999 RDR1YOR380W 1641 nt5.52□□□□□ -1.53
RPB9P27999 RRP9YPR137W 1722 nt5.51□□□□□ -1.53
RPB9P27999 CDC13YDL220C 2775 nt5.51□□□□□ -1.53
RPB9P27999 UBP13YBL067C 2244 nt5.51□□□□□ -1.53
RPB9P27999 YEL075W-AYEL075W-A 612 nt5.51□□□□□ -1.53
RPB9P27999 HIS1YER055C 894 nt5.51□□□□□ -1.53
RPB9P27999 YGL102CYGL102C 429 nt5.51□□□□□ -1.53
RPB9P27999 YKL147CYKL147C 618 nt5.51□□□□□ -1.53
RPB9P27999 YLR361C-AYLR361C-A 297 nt5.51□□□□□ -1.53
RPB9P27999 YLR463CYLR463C 552 nt5.51□□□□□ -1.53
RPB9P27999 YMR122CYMR122C 375 nt5.51□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms