Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cbx3P23198 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cbx3P23198 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cbx3P23198 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cbx3P23198 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cbx3P23198 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cbx3P23198 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cbx3P23198 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cbx3P23198 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cbx3P23198 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cbx3P23198 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.52■□□□□ 0.88
Cbx3P23198 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cbx3P23198 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cbx3P23198 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cbx3P23198 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cbx3P23198 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.51■□□□□ 0.87
Cbx3P23198 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cbx3P23198 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cbx3P23198 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cbx3P23198 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cbx3P23198 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.5■□□□□ 0.87
Cbx3P23198 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cbx3P23198 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cbx3P23198 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cbx3P23198 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.49■□□□□ 0.87
Cbx3P23198 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cbx3P23198 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cbx3P23198 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cbx3P23198 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cbx3P23198 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.48■□□□□ 0.87
Cbx3P23198 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cbx3P23198 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.48■□□□□ 0.87
Cbx3P23198 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cbx3P23198 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cbx3P23198 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cbx3P23198 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cbx3P23198 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cbx3P23198 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cbx3P23198 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cbx3P23198 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Cbx3P23198 Iqck-206ENSMUST00000208658 2891 ntBASIC20.46■□□□□ 0.87
Cbx3P23198 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.45■□□□□ 0.86
Cbx3P23198 Gm24804-201ENSMUST00000174982 85 ntBASIC20.45■□□□□ 0.86
Cbx3P23198 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cbx3P23198 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cbx3P23198 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cbx3P23198 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cbx3P23198 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.44■□□□□ 0.86
Cbx3P23198 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cbx3P23198 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cbx3P23198 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cbx3P23198 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Cbx3P23198 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.43■□□□□ 0.86
Cbx3P23198 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cbx3P23198 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cbx3P23198 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cbx3P23198 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cbx3P23198 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cbx3P23198 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.42■□□□□ 0.86
Cbx3P23198 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cbx3P23198 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.42■□□□□ 0.86
Cbx3P23198 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cbx3P23198 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cbx3P23198 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cbx3P23198 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cbx3P23198 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cbx3P23198 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cbx3P23198 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cbx3P23198 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cbx3P23198 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cbx3P23198 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cbx3P23198 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cbx3P23198 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cbx3P23198 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cbx3P23198 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cbx3P23198 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cbx3P23198 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cbx3P23198 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
Cbx3P23198 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cbx3P23198 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cbx3P23198 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.38■□□□□ 0.85
Cbx3P23198 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Cbx3P23198 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cbx3P23198 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cbx3P23198 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.37■□□□□ 0.85
Cbx3P23198 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cbx3P23198 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cbx3P23198 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cbx3P23198 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cbx3P23198 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cbx3P23198 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cbx3P23198 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.35■□□□□ 0.85
Cbx3P23198 Gm16148-201ENSMUST00000119653 893 ntBASIC20.35■□□□□ 0.85
Cbx3P23198 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms