Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA1P0DJI8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.03■□□□□ 0.8
SAA1P0DJI8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA1P0DJI8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.03■□□□□ 0.8
SAA1P0DJI8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAA1P0DJI8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SAA1P0DJI8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SAA1P0DJI8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SAA1P0DJI8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.02■□□□□ 0.8
SAA1P0DJI8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAA1P0DJI8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SAA1P0DJI8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.01■□□□□ 0.79
SAA1P0DJI8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
SAA1P0DJI8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAA1P0DJI8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA1P0DJI8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA1P0DJI8 AL449106.1-201ENST00000608517 1980 ntBASIC20.01■□□□□ 0.79
SAA1P0DJI8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA1P0DJI8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA1P0DJI8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20■□□□□ 0.79
SAA1P0DJI8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20■□□□□ 0.79
SAA1P0DJI8 LINC01971-201ENST00000617888 1048 ntBASIC20■□□□□ 0.79
SAA1P0DJI8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAA1P0DJI8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SAA1P0DJI8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA1P0DJI8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAA1P0DJI8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SAA1P0DJI8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SAA1P0DJI8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SAA1P0DJI8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SAA1P0DJI8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.98■□□□□ 0.79
SAA1P0DJI8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.98■□□□□ 0.79
SAA1P0DJI8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SAA1P0DJI8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SAA1P0DJI8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.97■□□□□ 0.79
SAA1P0DJI8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.97■□□□□ 0.79
SAA1P0DJI8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.96■□□□□ 0.79
SAA1P0DJI8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SAA1P0DJI8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SAA1P0DJI8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SAA1P0DJI8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SAA1P0DJI8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.96■□□□□ 0.79
SAA1P0DJI8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SAA1P0DJI8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SAA1P0DJI8 AP004609.3-201ENST00000610705 1884 ntBASIC19.94■□□□□ 0.78
SAA1P0DJI8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA1P0DJI8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA1P0DJI8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.94■□□□□ 0.78
SAA1P0DJI8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SAA1P0DJI8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SAA1P0DJI8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.93■□□□□ 0.78
SAA1P0DJI8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.93■□□□□ 0.78
SAA1P0DJI8 WHAMMP3-201ENST00000611636 1609 ntBASIC19.93■□□□□ 0.78
SAA1P0DJI8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SAA1P0DJI8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.92■□□□□ 0.78
SAA1P0DJI8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L13-201ENST00000554103 1267 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L15-201ENST00000611059 1267 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L23-201ENST00000615195 1269 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L24-201ENST00000617576 1269 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L22-201ENST00000618238 1269 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L20-201ENST00000619712 1269 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L21-201ENST00000622058 1269 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L10-201ENST00000622460 1267 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 DUX4L25-201ENST00000624915 1269 ntBASIC19.92■□□□□ 0.78
SAA1P0DJI8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAA1P0DJI8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.91■□□□□ 0.78
SAA1P0DJI8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.91■□□□□ 0.78
SAA1P0DJI8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA1P0DJI8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA1P0DJI8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SAA1P0DJI8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.9■□□□□ 0.78
SAA1P0DJI8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.9■□□□□ 0.78
SAA1P0DJI8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAA1P0DJI8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SAA1P0DJI8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.89■□□□□ 0.77
SAA1P0DJI8 DUX4L11-201ENST00000611504 1267 ntBASIC19.89■□□□□ 0.77
SAA1P0DJI8 DUX4L12-201ENST00000614593 1267 ntBASIC19.89■□□□□ 0.77
SAA1P0DJI8 DUX4L14-201ENST00000621227 1267 ntBASIC19.89■□□□□ 0.77
SAA1P0DJI8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAA1P0DJI8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA1P0DJI8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SAA1P0DJI8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SAA1P0DJI8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SAA1P0DJI8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SAA1P0DJI8 AC091060.1-201ENST00000623524 1766 ntBASIC19.88■□□□□ 0.77
SAA1P0DJI8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.87■□□□□ 0.77
SAA1P0DJI8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SAA1P0DJI8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAA1P0DJI8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAA1P0DJI8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAA1P0DJI8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SAA1P0DJI8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAA1P0DJI8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms