Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 TAE1YBR261C 699 nt10.85□□□□□ -0.67
TY2B-LR1P0C2J3 MAM3YOL060C 2121 nt10.85□□□□□ -0.67
TY2B-LR1P0C2J3 LIP5YOR196C 1245 nt10.85□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)BtD(GUC)B 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)DtD(GUC)D 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)G1tD(GUC)G1 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)G2tD(GUC)G2 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)I1tD(GUC)I1 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)I2tD(GUC)I2 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)J1tD(GUC)J1 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)J2tD(GUC)J2 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)J3tD(GUC)J3 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)J4tD(GUC)J4 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)KtD(GUC)K 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)L1tD(GUC)L1 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)L2tD(GUC)L2 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)MtD(GUC)M 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 tD(GUC)OtD(GUC)O 72 nt10.84□□□□□ -0.67
TY2B-LR1P0C2J3 BEM1YBR200W 1656 nt10.83□□□□□ -0.68
TY2B-LR1P0C2J3 YLL056CYLL056C 897 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 snR4snR4 186 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 ERG24YNL280C 1317 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 EMP65YER140W 1671 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 FMO1YHR176W 1299 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 YOL099CYOL099C 492 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 NBA1YOL070C 1506 nt10.82□□□□□ -0.68
TY2B-LR1P0C2J3 GPA2YER020W 1350 nt10.81□□□□□ -0.68
TY2B-LR1P0C2J3 HNM1YGL077C 1692 nt10.81□□□□□ -0.68
TY2B-LR1P0C2J3 PGI1YBR196C 1665 nt10.81□□□□□ -0.68
TY2B-LR1P0C2J3 AFG3YER017C 2286 nt10.81□□□□□ -0.68
TY2B-LR1P0C2J3 YNL097W-AYNL097W-A 156 nt10.8□□□□□ -0.68
TY2B-LR1P0C2J3 LYS21YDL131W 1323 nt10.78□□□□□ -0.68
TY2B-LR1P0C2J3 ZWF1YNL241C 1518 nt10.78□□□□□ -0.68
TY2B-LR1P0C2J3 MIM1YOL026C 342 nt10.77□□□□□ -0.68
TY2B-LR1P0C2J3 ERR1YOR393W 1314 nt10.77□□□□□ -0.69
TY2B-LR1P0C2J3 ERR2YPL281C 1314 nt10.77□□□□□ -0.69
TY2B-LR1P0C2J3 HMG2YLR450W 3138 nt10.76□□□□□ -0.69
TY2B-LR1P0C2J3 HPT1YDR399W 666 nt10.75□□□□□ -0.69
TY2B-LR1P0C2J3 ICP55YER078C 1536 nt10.75□□□□□ -0.69
TY2B-LR1P0C2J3 VMA3YEL027W 483 nt10.75□□□□□ -0.69
TY2B-LR1P0C2J3 YGL102CYGL102C 429 nt10.75□□□□□ -0.69
TY2B-LR1P0C2J3 HED1YDR014W-A 489 nt10.74□□□□□ -0.69
TY2B-LR1P0C2J3 SMX3YPR182W 261 nt10.74□□□□□ -0.69
TY2B-LR1P0C2J3 PMT1YDL095W 2454 nt10.73□□□□□ -0.69
TY2B-LR1P0C2J3 REC107YJR021C 945 nt10.72□□□□□ -0.69
TY2B-LR1P0C2J3 MOG1YJR074W 657 nt10.72□□□□□ -0.69
TY2B-LR1P0C2J3 ERG27YLR100W 1044 nt10.72□□□□□ -0.69
TY2B-LR1P0C2J3 CUE4YML101C 354 nt10.72□□□□□ -0.69
TY2B-LR1P0C2J3 PFS2YNL317W 1398 nt10.72□□□□□ -0.69
TY2B-LR1P0C2J3 TPI1YDR050C 747 nt10.7□□□□□ -0.7
TY2B-LR1P0C2J3 YKL018C-AYKL018C-A 300 nt10.7□□□□□ -0.7
TY2B-LR1P0C2J3 RPL43AYPR043W 279 nt10.69□□□□□ -0.7
TY2B-LR1P0C2J3 IVY1YDR229W 1362 nt10.68□□□□□ -0.7
TY2B-LR1P0C2J3 NAS6YGR232W 687 nt10.68□□□□□ -0.7
TY2B-LR1P0C2J3 OM45YIL136W 1182 nt10.68□□□□□ -0.7
TY2B-LR1P0C2J3 RAD59YDL059C 717 nt10.67□□□□□ -0.7
TY2B-LR1P0C2J3 GTS1YGL181W 1191 nt10.67□□□□□ -0.7
TY2B-LR1P0C2J3 PRI1YIR008C 1230 nt10.67□□□□□ -0.7
TY2B-LR1P0C2J3 YBR027CYBR027C 333 nt10.67□□□□□ -0.7
TY2B-LR1P0C2J3 MRPL10YNL284C 969 nt10.66□□□□□ -0.7
TY2B-LR1P0C2J3 CDC7YDL017W 1524 nt10.65□□□□□ -0.7
TY2B-LR1P0C2J3 MSP1YGR028W 1089 nt10.65□□□□□ -0.7
TY2B-LR1P0C2J3 CSL4YNL232W 879 nt10.65□□□□□ -0.7
TY2B-LR1P0C2J3 YMR279CYMR279C 1623 nt10.65□□□□□ -0.7
TY2B-LR1P0C2J3 TIF2YJL138C 1188 nt10.65□□□□□ -0.71
TY2B-LR1P0C2J3 YKL077WYKL077W 1179 nt10.65□□□□□ -0.71
TY2B-LR1P0C2J3 TIF1YKR059W 1188 nt10.65□□□□□ -0.71
TY2B-LR1P0C2J3 MRPL23YOR150W 492 nt10.65□□□□□ -0.71
TY2B-LR1P0C2J3 MHT1YLL062C 975 nt10.64□□□□□ -0.71
TY2B-LR1P0C2J3 YAL045CYAL045C 309 nt10.63□□□□□ -0.71
TY2B-LR1P0C2J3 CUP2YGL166W 678 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 ERG8YMR220W 1356 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 SEC62YPL094C 825 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 DUS3YLR401C 2007 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 YHR213W-BYHR213W-B 300 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 SEN34YAR008W 828 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 YAR064WYAR064W 300 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 SPG5YMR191W 1122 nt10.62□□□□□ -0.71
TY2B-LR1P0C2J3 DLD1YDL174C 1764 nt10.61□□□□□ -0.71
TY2B-LR1P0C2J3 DSF1YEL070W 1509 nt10.61□□□□□ -0.71
TY2B-LR1P0C2J3 YNR073CYNR073C 1509 nt10.61□□□□□ -0.71
TY2B-LR1P0C2J3 YPR196WYPR196W 1413 nt10.61□□□□□ -0.71
TY2B-LR1P0C2J3 PTC7YHR076W 1032 nt10.61□□□□□ -0.71
TY2B-LR1P0C2J3 THR1YHR025W 1074 nt10.58□□□□□ -0.72
TY2B-LR1P0C2J3 CTA1YDR256C 1548 nt10.58□□□□□ -0.72
TY2B-LR1P0C2J3 MSS51YLR203C 1311 nt10.58□□□□□ -0.72
TY2B-LR1P0C2J3 YLR157W-EYLR157W-E 165 nt10.57□□□□□ -0.72
TY2B-LR1P0C2J3 EGD2YHR193C 525 nt10.57□□□□□ -0.72
TY2B-LR1P0C2J3 PEX3YDR329C 1326 nt10.56□□□□□ -0.72
TY2B-LR1P0C2J3 RNH1YMR234W 1047 nt10.56□□□□□ -0.72
TY2B-LR1P0C2J3 YBL113CYBL113C 2379 nt10.56□□□□□ -0.72
TY2B-LR1P0C2J3 DON1YDR273W 1098 nt10.55□□□□□ -0.72
TY2B-LR1P0C2J3 DIA4YHR011W 1341 nt10.55□□□□□ -0.72
TY2B-LR1P0C2J3 UIP5YKR044W 1332 nt10.55□□□□□ -0.72
TY2B-LR1P0C2J3 RPL31BYLR406C 342 nt10.54□□□□□ -0.72
TY2B-LR1P0C2J3 SUR7YML052W 909 nt10.54□□□□□ -0.72
TY2B-LR1P0C2J3 RTC2YBR147W 891 nt10.54□□□□□ -0.72
TY2B-LR1P0C2J3 HVG1YER039C 750 nt10.53□□□□□ -0.72
TY2B-LR1P0C2J3 HIS1YER055C 894 nt10.52□□□□□ -0.72
TY2B-LR1P0C2J3 MPC2YHR162W 390 nt10.52□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms