Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h2P0C090 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h2P0C090 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h2P0C090 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h2P0C090 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h2P0C090 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.29■■□□□ 1.32
Rc3h2P0C090 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Rc3h2P0C090 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h2P0C090 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.28■■□□□ 1.32
Rc3h2P0C090 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h2P0C090 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Rc3h2P0C090 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rc3h2P0C090 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rc3h2P0C090 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h2P0C090 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h2P0C090 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h2P0C090 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.24■■□□□ 1.31
Rc3h2P0C090 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h2P0C090 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h2P0C090 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rc3h2P0C090 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h2P0C090 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rc3h2P0C090 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h2P0C090 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rc3h2P0C090 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rc3h2P0C090 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.21■■□□□ 1.31
Rc3h2P0C090 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Rc3h2P0C090 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h2P0C090 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.21■■□□□ 1.31
Rc3h2P0C090 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h2P0C090 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h2P0C090 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rc3h2P0C090 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rc3h2P0C090 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rc3h2P0C090 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rc3h2P0C090 Gm44428-201ENSMUST00000204474 874 ntBASIC23.2■■□□□ 1.3
Rc3h2P0C090 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h2P0C090 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h2P0C090 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.19■■□□□ 1.3
Rc3h2P0C090 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h2P0C090 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h2P0C090 Gm10420-201ENSMUST00000121713 882 ntBASIC23.18■■□□□ 1.3
Rc3h2P0C090 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Rc3h2P0C090 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h2P0C090 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h2P0C090 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rc3h2P0C090 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h2P0C090 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.15■■□□□ 1.3
Rc3h2P0C090 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rc3h2P0C090 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.15■■□□□ 1.3
Rc3h2P0C090 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h2P0C090 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rc3h2P0C090 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Rc3h2P0C090 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h2P0C090 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h2P0C090 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h2P0C090 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h2P0C090 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h2P0C090 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rc3h2P0C090 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h2P0C090 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h2P0C090 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h2P0C090 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.12■■□□□ 1.29
Rc3h2P0C090 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.12■■□□□ 1.29
Rc3h2P0C090 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h2P0C090 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h2P0C090 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rc3h2P0C090 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rc3h2P0C090 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rc3h2P0C090 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.1■■□□□ 1.29
Rc3h2P0C090 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Rc3h2P0C090 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h2P0C090 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rc3h2P0C090 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.08■■□□□ 1.29
Rc3h2P0C090 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h2P0C090 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.08■■□□□ 1.29
Rc3h2P0C090 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h2P0C090 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rc3h2P0C090 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.08■■□□□ 1.28
Rc3h2P0C090 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h2P0C090 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h2P0C090 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rc3h2P0C090 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rc3h2P0C090 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rc3h2P0C090 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Rc3h2P0C090 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h2P0C090 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h2P0C090 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms